BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034106
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27471.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]   138   5e-31
ref|NP_201453.1| pentatricopeptide repeat-containing protein [Ar...   128   5e-28
ref|XP_002866756.1| pentatricopeptide repeat-containing protein ...   127   1e-27

>emb|CBI27471.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/93 (66%), Positives = 77/93 (82%)
 Frame = -2

Query: 281 WIHAYIDKNQMQIDEALGCNLVDMYAKCGDIVDALKVFRTIKNKGVHTWTAMITGFAIHG 102
           WIHAYI K++++ID  LGC L+DMYAKCGD+ +A++VFR ++ KGV  WTAMI+G+AIHG
Sbjct: 223 WIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHG 282

Query: 101 CGREALELFRDMQKAGVKPNQITFTSALTACSH 3
            GREALE F  MQ AGV+PNQ+TFT  LTACSH
Sbjct: 283 RGREALEWFMKMQTAGVEPNQMTFTGILTACSH 315


>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/93 (66%), Positives = 77/93 (82%)
 Frame = -2

Query: 281 WIHAYIDKNQMQIDEALGCNLVDMYAKCGDIVDALKVFRTIKNKGVHTWTAMITGFAIHG 102
           WIHAYI K++++ID  LGC L+DMYAKCGD+ +A++VFR ++ KGV  WTAMI+G+AIHG
Sbjct: 271 WIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHG 330

Query: 101 CGREALELFRDMQKAGVKPNQITFTSALTACSH 3
            GREALE F  MQ AGV+PNQ+TFT  LTACSH
Sbjct: 331 RGREALEWFMKMQTAGVEPNQMTFTGILTACSH 363



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/73 (38%), Positives = 45/73 (61%)
 Frame = -2

Query: 224 NLVDMYAKCGDIVDALKVFRTIKNKGVHTWTAMITGFAIHGCGREALELFRDMQKAGVKP 45
           +++D Y KCG+I  A ++F  +  + + +WT+MI+G    G  +EAL LF  MQ AG+K 
Sbjct: 189 SMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKL 248

Query: 44  NQITFTSALTACS 6
           + +   S L AC+
Sbjct: 249 DNVALVSTLQACA 261


>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/93 (66%), Positives = 77/93 (82%)
 Frame = -2

Query: 281 WIHAYIDKNQMQIDEALGCNLVDMYAKCGDIVDALKVFRTIKNKGVHTWTAMITGFAIHG 102
           WIHAYI K++++ID  LGC L+DMYAKCGD+ +A++VFR ++ KGV  WTAMI+G+AIHG
Sbjct: 271 WIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHG 330

Query: 101 CGREALELFRDMQKAGVKPNQITFTSALTACSH 3
            GREALE F  MQ AGV+PNQ+TFT  LTACSH
Sbjct: 331 RGREALEWFMKMQTAGVEPNQMTFTGILTACSH 363



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/73 (38%), Positives = 45/73 (61%)
 Frame = -2

Query: 224 NLVDMYAKCGDIVDALKVFRTIKNKGVHTWTAMITGFAIHGCGREALELFRDMQKAGVKP 45
           +++D Y KCG+I  A ++F  +  + + +WT+MI+G    G  +EAL LF  MQ AG+K 
Sbjct: 189 SMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKL 248

Query: 44  NQITFTSALTACS 6
           + +   S L AC+
Sbjct: 249 DNVALVSTLQACA 261


>ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g66520 gi|10177533|dbj|BAB10928.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332010841|gb|AED98224.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 620

 Score =  128 bits (321), Expect = 5e-28
 Identities = 54/93 (58%), Positives = 75/93 (80%)
 Frame = -2

Query: 281 WIHAYIDKNQMQIDEALGCNLVDMYAKCGDIVDALKVFRTIKNKGVHTWTAMITGFAIHG 102
           WIH+Y++K ++++D  LGC L+DMYAKCG++ +AL+VF+ IK K V  WTA+I+G+A HG
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327

Query: 101 CGREALELFRDMQKAGVKPNQITFTSALTACSH 3
            GREA+  F +MQK G+KPN ITFT+ LTACS+
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSY 360



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/79 (34%), Positives = 48/79 (60%)
 Frame = -2

Query: 242 DEALGCNLVDMYAKCGDIVDALKVFRTIKNKGVHTWTAMITGFAIHGCGREALELFRDMQ 63
           D+    +++  Y K G +  AL +FR +  K   +WT MI+G+      +EAL+LF +MQ
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239

Query: 62  KAGVKPNQITFTSALTACS 6
            + V+P+ ++  +AL+AC+
Sbjct: 240 NSDVEPDNVSLANALSACA 258


>ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312591|gb|EFH43015.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 649

 Score =  127 bits (318), Expect = 1e-27
 Identities = 54/93 (58%), Positives = 74/93 (79%)
 Frame = -2

Query: 281 WIHAYIDKNQMQIDEALGCNLVDMYAKCGDIVDALKVFRTIKNKGVHTWTAMITGFAIHG 102
           WIH+Y+ K ++++D  LGC L+DMYAKCGD+ +AL+VF+ I+ K V  WTA+I+G+A HG
Sbjct: 297 WIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHG 356

Query: 101 CGREALELFRDMQKAGVKPNQITFTSALTACSH 3
            GREA+  F +MQK G+KPN ITFT+ LTACS+
Sbjct: 357 HGREAISKFMEMQKMGIKPNVITFTTVLTACSY 389



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/73 (38%), Positives = 48/73 (65%)
 Frame = -2

Query: 224 NLVDMYAKCGDIVDALKVFRTIKNKGVHTWTAMITGFAIHGCGREALELFRDMQKAGVKP 45
           +++  YAK G +  AL +FR +  K   +WT MI+G+   G  +EAL+LF +MQ + V+P
Sbjct: 215 SVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEP 274

Query: 44  NQITFTSALTACS 6
           + ++  +AL+AC+
Sbjct: 275 DNVSLANALSACA 287