BLASTX nr result

ID: Coptis25_contig00034100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034100
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316038.1| predicted protein [Populus trichocarpa] gi|2...    67   3e-19
ref|XP_003631949.1| PREDICTED: uncharacterized protein LOC100251...    57   1e-16
ref|XP_003559207.1| PREDICTED: uncharacterized protein LOC100827...    56   3e-14
ref|XP_002523650.1| conserved hypothetical protein [Ricinus comm...    68   9e-10
ref|XP_004134503.1| PREDICTED: uncharacterized protein LOC101215...    64   1e-08

>ref|XP_002316038.1| predicted protein [Populus trichocarpa] gi|222865078|gb|EEF02209.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score = 66.6 bits (161), Expect(2) = 3e-19
 Identities = 26/53 (49%), Positives = 37/53 (69%)
 Frame = -1

Query: 163 LSTHTNVTHICSVRLDHIELYHVISRFSHIICGHFLSERPDGLLECTFCRCTC 5
           LS+  + T+IC VRLD ++  HV +RFSH  CGH +++ P G +EC+FC C C
Sbjct: 209 LSSEASCTYICRVRLDQVDQCHVNTRFSHSFCGHVVNKMPSGDVECSFCHCNC 261



 Score = 53.5 bits (127), Expect(2) = 3e-19
 Identities = 24/32 (75%), Positives = 26/32 (81%)
 Frame = -2

Query: 261 WFEKEVGASLVNLSCLPALLNSSCLHKLSYLS 166
           W++   GA  VNLSCLPALLNSSCLHKLS LS
Sbjct: 176 WYDNAAGAFFVNLSCLPALLNSSCLHKLSCLS 207


>ref|XP_003631949.1| PREDICTED: uncharacterized protein LOC100251734 [Vitis vinifera]
          Length = 653

 Score = 57.4 bits (137), Expect(2) = 1e-16
 Identities = 25/45 (55%), Positives = 30/45 (66%)
 Frame = -1

Query: 139 HICSVRLDHIELYHVISRFSHIICGHFLSERPDGLLECTFCRCTC 5
           +IC V LD IE  HV +RFSH +CGHF +E P G  +C FC C C
Sbjct: 513 NICRVWLDQIEHCHVNTRFSHAVCGHFANETPCG-FKCNFCHCNC 556



 Score = 53.9 bits (128), Expect(2) = 1e-16
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = -2

Query: 264 LWFEKEVGASLVNLSCLPALLNSSCLHKLSYLS 166
           LWFE +  +S VNLSCLPALLNSSCLH+LSYLS
Sbjct: 471 LWFESD-RSSFVNLSCLPALLNSSCLHQLSYLS 502


>ref|XP_003559207.1| PREDICTED: uncharacterized protein LOC100827014 [Brachypodium
           distachyon]
          Length = 697

 Score = 55.8 bits (133), Expect(2) = 3e-14
 Identities = 23/48 (47%), Positives = 32/48 (66%)
 Frame = -1

Query: 148 NVTHICSVRLDHIELYHVISRFSHIICGHFLSERPDGLLECTFCRCTC 5
           N THIC VRLDHI+   +     H +CG+ ++E  DGLL+C+FC+  C
Sbjct: 556 NRTHICRVRLDHIDRNSLKLSLFHNLCGYVVNELSDGLLQCSFCKVAC 603



 Score = 47.4 bits (111), Expect(2) = 3e-14
 Identities = 23/35 (65%), Positives = 26/35 (74%)
 Frame = -2

Query: 261 WFEKEVGASLVNLSCLPALLNSSCLHKLSYLSVCP 157
           W EKE G+  VNLS LPALLNS+CL+ LS LS  P
Sbjct: 518 WCEKESGSLFVNLSLLPALLNSTCLYNLSLLSDLP 552


>ref|XP_002523650.1| conserved hypothetical protein [Ricinus communis]
           gi|223537102|gb|EEF38736.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 661

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/83 (38%), Positives = 48/83 (57%)
 Frame = -1

Query: 253 EGSWSFLG*SKLPSCIAKFILSPQVVLPFGLSTHTNVTHICSVRLDHIELYHVISRFSHI 74
           E    F+  S LP+ +    L  Q+     LS   + T+IC VRLD ++  HV +RF+H 
Sbjct: 484 EAGAMFVNLSCLPALLNSSCLQ-QLFCLSDLSCDASCTYICRVRLDQVDQCHVSTRFAHS 542

Query: 73  ICGHFLSERPDGLLECTFCRCTC 5
           +CGH +++ P G +EC+FC C C
Sbjct: 543 LCGHAVNQTPGGFVECSFCNCNC 565


>ref|XP_004134503.1| PREDICTED: uncharacterized protein LOC101215087 [Cucumis sativus]
           gi|449503901|ref|XP_004162221.1| PREDICTED:
           uncharacterized protein LOC101228492 [Cucumis sativus]
          Length = 673

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/79 (41%), Positives = 47/79 (59%)
 Frame = -1

Query: 241 SFLG*SKLPSCIAKFILSPQVVLPFGLSTHTNVTHICSVRLDHIELYHVISRFSHIICGH 62
           SF+  S LP+ +    L     L   L+++T+ T +C VRLD +   HV ++F H ICGH
Sbjct: 500 SFVNLSCLPALLTSSCLHKLSRLS-DLTSNTHGTKVCQVRLDQVSHCHVSTKFLHAICGH 558

Query: 61  FLSERPDGLLECTFCRCTC 5
           F+ E P   +EC+FCRC C
Sbjct: 559 FVEETP-ARIECSFCRCEC 576



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/33 (81%), Positives = 27/33 (81%)
 Frame = -2

Query: 264 LWFEKEVGASLVNLSCLPALLNSSCLHKLSYLS 166
           LW E  VGAS VNLSCLPALL SSCLHKLS LS
Sbjct: 491 LWIENHVGASFVNLSCLPALLTSSCLHKLSRLS 523


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