BLASTX nr result

ID: Coptis25_contig00034091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034091
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530523.1| PREDICTED: vacuolar protein sorting-associat...    73   3e-11
ref|XP_002283066.1| PREDICTED: vacuolar protein sorting-associat...    73   3e-11
gb|AFK45318.1| unknown [Lotus japonicus]                               72   4e-11
ref|XP_002308308.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002275998.1| PREDICTED: vacuolar protein sorting-associat...    72   5e-11

>ref|XP_003530523.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog
           1-like [Glycine max]
          Length = 218

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/57 (70%), Positives = 43/57 (75%)
 Frame = -1

Query: 188 MFMQIPGIPN*ETNVLTLLDKLNETLEIQEKKVDVLLKKASVENEKAKEFTIAKNKR 18
           MF +I G P  E N LT LDKLNETLE+ EKK  VLLKKA+ E EKAKEFT AKNKR
Sbjct: 1   MFTRIFGKPKQEANTLTTLDKLNETLEMLEKKEKVLLKKAAAEVEKAKEFTRAKNKR 57


>ref|XP_002283066.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2
           [Vitis vinifera] gi|147840660|emb|CAN61998.1|
           hypothetical protein VITISV_007873 [Vitis vinifera]
           gi|297738716|emb|CBI27961.3| unnamed protein product
           [Vitis vinifera]
          Length = 218

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/57 (70%), Positives = 43/57 (75%)
 Frame = -1

Query: 188 MFMQIPGIPN*ETNVLTLLDKLNETLEIQEKKVDVLLKKASVENEKAKEFTIAKNKR 18
           MF +I G P  E N LT LDKLNETLE+ EKK  VLLKKA+ E EKAKEFT AKNKR
Sbjct: 1   MFTRIFGKPKQEANALTTLDKLNETLEMLEKKEKVLLKKAAAEVEKAKEFTRAKNKR 57


>gb|AFK45318.1| unknown [Lotus japonicus]
          Length = 218

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/57 (70%), Positives = 42/57 (73%)
 Frame = -1

Query: 188 MFMQIPGIPN*ETNVLTLLDKLNETLEIQEKKVDVLLKKASVENEKAKEFTIAKNKR 18
           MF +I G P  E N LT  DKLNETLE+ EKK  VLLKKAS E EKAKEFT AKNKR
Sbjct: 1   MFTRIFGKPKQEANALTTFDKLNETLEMLEKKEKVLLKKASAEVEKAKEFTRAKNKR 57


>ref|XP_002308308.1| predicted protein [Populus trichocarpa] gi|222854284|gb|EEE91831.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/57 (68%), Positives = 43/57 (75%)
 Frame = -1

Query: 188 MFMQIPGIPN*ETNVLTLLDKLNETLEIQEKKVDVLLKKASVENEKAKEFTIAKNKR 18
           MF ++ G P  ETN LT LDKLNETLE+ EKK  VLLKKA+ E EKAKEFT  KNKR
Sbjct: 1   MFNRLFGKPKQETNALTTLDKLNETLEMLEKKEKVLLKKAAAEVEKAKEFTRGKNKR 57


>ref|XP_002275998.1| PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2
           [Vitis vinifera] gi|147832595|emb|CAN68229.1|
           hypothetical protein VITISV_026042 [Vitis vinifera]
           gi|296081601|emb|CBI20606.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/57 (68%), Positives = 43/57 (75%)
 Frame = -1

Query: 188 MFMQIPGIPN*ETNVLTLLDKLNETLEIQEKKVDVLLKKASVENEKAKEFTIAKNKR 18
           MF ++ G P  E N LT LDKLNETLE+ EKK  VLLKKA+ E EKAKEFT AKNKR
Sbjct: 1   MFTRLFGKPKQEANALTTLDKLNETLEMLEKKEGVLLKKAAAEVEKAKEFTRAKNKR 57


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