BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034075
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    60   2e-07
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    59   3e-07
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    59   4e-07
emb|CAB75484.1| putative protein [Arabidopsis thaliana]                57   2e-06

>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1529

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/54 (46%), Positives = 40/54 (74%)
 Frame = +2

Query: 56  KNLLVREVTRDEIIECLANIEDNKAPGSDGFSALFFKAAWRIVGDDFVKAVRNF 217
           +N+L REVT +EI + L  + +NK+PG DG+++ FFKA W + G DF+ A+++F
Sbjct: 743 QNILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSF 796


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/59 (45%), Positives = 41/59 (69%)
 Frame = +2

Query: 38  QLDENTKNLLVREVTRDEIIECLANIEDNKAPGSDGFSALFFKAAWRIVGDDFVKAVRN 214
           +L    +++L + VTR EI   + ++++NKAPG DGF+A FFK  W IVG+D + AVR+
Sbjct: 401 KLSSTQQHVLAQVVTRKEIKHAMFSLKNNKAPGLDGFNAGFFKRMWHIVGEDVINAVRS 459


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/68 (38%), Positives = 46/68 (67%)
 Frame = +2

Query: 14   EMGDIQVAQLDENTKNLLVREVTRDEIIECLANIEDNKAPGSDGFSALFFKAAWRIVGDD 193
            ++ D+   +  E    LL R VT +EI + L ++ ++K+PG DGF++ FFKA W I+G++
Sbjct: 840  DLQDLLPFRCSETEHELLTRVVTAEEIKKVLFSMPNDKSPGPDGFTSEFFKATWEILGNE 899

Query: 194  FVKAVRNF 217
            F+ A+++F
Sbjct: 900  FILAIQSF 907


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/69 (37%), Positives = 44/69 (63%)
 Frame = +2

Query: 11  TEMGDIQVAQLDENTKNLLVREVTRDEIIECLANIEDNKAPGSDGFSALFFKAAWRIVGD 190
           TE+  +   +  +  +  L+R VT +EI + L  +  +K+PG DG+++ FFKA W I+GD
Sbjct: 431 TELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGD 490

Query: 191 DFVKAVRNF 217
           +F  AV++F
Sbjct: 491 EFTLAVQSF 499


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
 Frame = +2

Query: 14  EMGDIQVAQLDENTKNLLVREVTRD----EIIECLANIEDNKAPGSDGFSALFFKAAWRI 181
           ++  I  A    +  N++  E+T+D    EI E +  I D+KAPG DG +A F+K  W I
Sbjct: 24  QVSPIDFADFPSSVTNIINSELTQDFRDSEIFEAICQIGDDKAPGPDGLTARFYKQCWDI 83

Query: 182 VGDDFVKAVRNF 217
           VG+D +K V+ F
Sbjct: 84  VGNDVIKEVKLF 95