BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034073
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   118   6e-25
emb|CBI36964.3| unnamed protein product [Vitis vinifera]              118   6e-25
emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]   116   2e-24
ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi...   115   4e-24
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24

>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/120 (48%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
 Frame = -3

Query: 359 LKDIESAGRVIEEMKTDGISR-NWSIYANLASIYVKEGNFDQANVTLKQMEKRMDVRDRK 183
           L DIE A RV+EE+K +   + +W+ Y+NLA++YV    F++A + LK++E+ M   DR 
Sbjct: 227 LNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRL 286

Query: 182 AYYILIGLYSHTSNKLGEDRVWDSLKSAFPELTNMCYLSKLQALHRLGDTDGLKKCFDDW 3
           AY+ LI LY+  +N    +RVW+SLKSAFP+  NM Y   LQAL  L D DGLK CF++W
Sbjct: 287 AYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEW 346


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/120 (48%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
 Frame = -3

Query: 359 LKDIESAGRVIEEMKTDGISR-NWSIYANLASIYVKEGNFDQANVTLKQMEKRMDVRDRK 183
           L DIE A RV+EE+K +   + +W+ Y+NLA++YV    F++A + LK++E+ M   DR 
Sbjct: 266 LNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRL 325

Query: 182 AYYILIGLYSHTSNKLGEDRVWDSLKSAFPELTNMCYLSKLQALHRLGDTDGLKKCFDDW 3
           AY+ LI LY+  +N    +RVW+SLKSAFP+  NM Y   LQAL  L D DGLK CF++W
Sbjct: 326 AYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEW 385


>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
          Length = 494

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/119 (45%), Positives = 81/119 (68%)
 Frame = -3

Query: 359 LKDIESAGRVIEEMKTDGISRNWSIYANLASIYVKEGNFDQANVTLKQMEKRMDVRDRKA 180
           +KD E+  +V+E+MK  G+ R+W  Y NLA+IYV  G+  +AN  L+++E+  ++ D +A
Sbjct: 212 VKDFEAVEQVLEKMKKRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEA 271

Query: 179 YYILIGLYSHTSNKLGEDRVWDSLKSAFPELTNMCYLSKLQALHRLGDTDGLKKCFDDW 3
           + +LI LY+ TSN  G +R W+SLK A P++ N  YL  L AL +LGD  GL+KCF +W
Sbjct: 272 FRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEW 330


>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial [Vitis vinifera]
           gi|296089781|emb|CBI39600.3| unnamed protein product
           [Vitis vinifera]
          Length = 498

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/119 (44%), Positives = 81/119 (68%)
 Frame = -3

Query: 359 LKDIESAGRVIEEMKTDGISRNWSIYANLASIYVKEGNFDQANVTLKQMEKRMDVRDRKA 180
           +KD E+  +V+++MK  G+ R+W  Y NLA+IYV  G+  +AN  L+++E+  ++ D +A
Sbjct: 216 VKDFEAVEQVLDKMKKRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEA 275

Query: 179 YYILIGLYSHTSNKLGEDRVWDSLKSAFPELTNMCYLSKLQALHRLGDTDGLKKCFDDW 3
           + +LI LY+ TSN  G +R W+SLK A P++ N  YL  L AL +LGD  GL+KCF +W
Sbjct: 276 FRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEW 334


>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/121 (50%), Positives = 84/121 (69%), Gaps = 2/121 (1%)
 Frame = -3

Query: 359 LKDIESAGRVIEEMKTDGISR-NWSIYANLASIYVKEGNFDQANVTLKQMEKRMDVRDRK 183
           L D E   RV++EMK DG    +W+ Y NLA+IYVK G+FD+A   LK++E++++   R+
Sbjct: 193 LNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEEQIERDYRE 252

Query: 182 AYYILIGLYSHTSNKLGE-DRVWDSLKSAFPELTNMCYLSKLQALHRLGDTDGLKKCFDD 6
           AY+ LI LY+ TSN LGE +RVW+SLKS F   TN+ YL+ L  L +L D +GL KCF +
Sbjct: 253 AYHFLITLYAGTSN-LGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCFKE 311

Query: 5   W 3
           W
Sbjct: 312 W 312