BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034071
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containi...   132   4e-29
ref|XP_003589765.1| Pentatricopeptide repeat-containing protein ...   131   6e-29
ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [S...   129   3e-28
gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indi...   127   7e-28
tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea m...   127   9e-28

>ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 836

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/102 (61%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
 Frame = -2

Query: 311  NDVRRKLEELLKKIEDTGDYIN-KNGSEESWGYHSEKLAVAFGLLSLPGCVPVHVMKNLR 135
            N+V  KLEE++KKIEDTG Y++  + +  S  YHSEKLA AFGLLSLP  +P+ V KNLR
Sbjct: 735  NEVYVKLEEMMKKIEDTGRYVSIVSCAHRSQKYHSEKLAFAFGLLSLPPWMPIQVTKNLR 794

Query: 134  VCTDCHTFLKLTSLVTARKLVVRDVHRFHHFRSGSCSCGDYW 9
            VC DCH  +KL SLVT+R+L++RD  RFHHF+ G CSC DYW
Sbjct: 795  VCNDCHLVIKLLSLVTSRELIMRDGFRFHHFKDGFCSCRDYW 836


>ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355478813|gb|AES60016.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/100 (63%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = -2

Query: 308  DVRRKLEELLKKIEDTGDYINKNGS-EESWGYHSEKLAVAFGLLSLPGCVPVHVMKNLRV 132
            +V  KLEE++K IEDTG YI    S   S  YHSEKLA AFGLL+LP  +P+HVMKNLRV
Sbjct: 775  EVYLKLEEMMKMIEDTGKYITVESSVHRSKKYHSEKLAFAFGLLNLPSWMPIHVMKNLRV 834

Query: 131  CTDCHTFLKLTSLVTARKLVVRDVHRFHHFRSGSCSCGDY 12
            C DCH  +KL SLVT+R+L++RD +RFHHF+ G CSC DY
Sbjct: 835  CDDCHLVIKLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874


>ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
            gi|241939581|gb|EES12726.1| hypothetical protein
            SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/99 (60%), Positives = 76/99 (76%)
 Frame = -2

Query: 305  VRRKLEELLKKIEDTGDYINKNGSEESWGYHSEKLAVAFGLLSLPGCVPVHVMKNLRVCT 126
            +R+KL+EL++KI   G Y+ +  S  S  +HSEKLAVAFGL+SLP  +P+H+MKNLR+C 
Sbjct: 769  IRKKLDELMEKIARLG-YV-RTDSPRSEIHHSEKLAVAFGLMSLPAWMPIHIMKNLRICG 826

Query: 125  DCHTFLKLTSLVTARKLVVRDVHRFHHFRSGSCSCGDYW 9
            DCHT +KL S VT R+ V+RD  RFHHF  GSCSCGDYW
Sbjct: 827  DCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865


>gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/99 (60%), Positives = 77/99 (77%)
 Frame = -2

Query: 305  VRRKLEELLKKIEDTGDYINKNGSEESWGYHSEKLAVAFGLLSLPGCVPVHVMKNLRVCT 126
            +R KL+EL++KI   G Y+ +  S  S  +HSEKLAVAFG++SLP  +P+H+MKNLR+C 
Sbjct: 769  IRNKLDELMEKIAHLG-YV-RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICG 826

Query: 125  DCHTFLKLTSLVTARKLVVRDVHRFHHFRSGSCSCGDYW 9
            DCHT +KL S VT R+ V+RD  RFHHF+SGSCSCGDYW
Sbjct: 827  DCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865


>tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/99 (59%), Positives = 76/99 (76%)
 Frame = -2

Query: 305  VRRKLEELLKKIEDTGDYINKNGSEESWGYHSEKLAVAFGLLSLPGCVPVHVMKNLRVCT 126
            +R+KL+EL++KI   G Y+ +  S  S  +HSEKLAVAFGL++LP  +P+H+MKNLR+C 
Sbjct: 769  IRKKLDELMEKIARLG-YV-RTDSTRSEIHHSEKLAVAFGLMTLPTWMPIHIMKNLRICG 826

Query: 125  DCHTFLKLTSLVTARKLVVRDVHRFHHFRSGSCSCGDYW 9
            DCHT +KL S VT R+ V+RD  RFHHF  GSCSCGDYW
Sbjct: 827  DCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865