BLASTX nr result

ID: Coptis25_contig00034069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034069
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515310.1| conserved hypothetical protein [Ricinus comm...   154   6e-36
ref|XP_002275125.1| PREDICTED: uncharacterized protein LOC100257...   147   1e-33
gb|ABK93302.1| unknown [Populus trichocarpa]                          146   2e-33
ref|XP_004152357.1| PREDICTED: uncharacterized protein LOC101212...   144   1e-32
gb|AAX47176.1| expressed protein [Pisum sativum]                      143   2e-32

>ref|XP_002515310.1| conserved hypothetical protein [Ricinus communis]
           gi|223545790|gb|EEF47294.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score =  154 bits (390), Expect = 6e-36
 Identities = 79/121 (65%), Positives = 91/121 (75%), Gaps = 4/121 (3%)
 Frame = -1

Query: 426 PCSPHRHQRPHNGTAS----SSYTSLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSA 259
           P SP+R+QR   G +S    SSY + GC ++SVACSQPRQRGSDSEGRFPSSPSDICHSA
Sbjct: 119 PVSPYRYQRSFGGFSSAPSTSSYPAHGCTVSSVACSQPRQRGSDSEGRFPSSPSDICHSA 178

Query: 258 DLRRAALLRSVQMRVQPPALPSFELAFSPDQEPMQNMEPEDQPCSCGKSIVQECSCQNQQ 79
           DLRRAALLRSVQMR QPP   SFEL F   QEP  N+E E++PCS  KS+V E   Q ++
Sbjct: 179 DLRRAALLRSVQMRTQPPGSSSFELPFGSGQEPASNIEAEERPCSYMKSLVDERDYQIEE 238

Query: 78  Q 76
           Q
Sbjct: 239 Q 239


>ref|XP_002275125.1| PREDICTED: uncharacterized protein LOC100257226 [Vitis vinifera]
           gi|297743955|emb|CBI36925.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score =  147 bits (370), Expect = 1e-33
 Identities = 85/146 (58%), Positives = 97/146 (66%), Gaps = 4/146 (2%)
 Frame = -1

Query: 426 PCSPHRHQRPHNGTASSSYT---SLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSAD 256
           P SPHR+QRP +  +SS  T   S GC L +VAC+QPRQRGSDSEGRFPSSPSDICHSAD
Sbjct: 113 PVSPHRYQRPFSALSSSGTTACPSHGCTLAAVACAQPRQRGSDSEGRFPSSPSDICHSAD 172

Query: 255 LRRAALLRSVQMRVQPPALPSFELAFSPDQEPMQNMEPEDQPCSCGKSIVQECSCQNQQQ 76
           LRRAALLRSVQMR QPP    FEL FS  QE ++NME E++PC     +V E        
Sbjct: 173 LRRAALLRSVQMRAQPPGPSVFELPFSAGQEAVRNMETEERPC-----LVDE-------- 219

Query: 75  IPDLFAEECSSIRDPDSEV-REKPYR 1
             D   EECSS+   + E  REK  R
Sbjct: 220 -RDYRIEECSSMGISEHEFNREKSCR 244


>gb|ABK93302.1| unknown [Populus trichocarpa]
          Length = 271

 Score =  146 bits (368), Expect = 2e-33
 Identities = 84/143 (58%), Positives = 100/143 (69%), Gaps = 4/143 (2%)
 Frame = -1

Query: 426 PCSPHRHQRPHNGTAS----SSYTSLGCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSA 259
           P SP+R+QRP  G +S    SS++S GC++TS   SQPRQRGSDSEGRFPSSPSDICHSA
Sbjct: 124 PVSPYRYQRPLCGFSSAPYSSSFSSHGCSVTS---SQPRQRGSDSEGRFPSSPSDICHSA 180

Query: 258 DLRRAALLRSVQMRVQPPALPSFELAFSPDQEPMQNMEPEDQPCSCGKSIVQECSCQNQQ 79
           DLRRAALLRSVQMR QP    SFEL FS   EP  NME E++PCS  KS+V+E      +
Sbjct: 181 DLRRAALLRSVQMRTQPTGSSSFELPFSSGHEPGSNMEAEERPCSYMKSLVEE------R 234

Query: 78  QIPDLFAEECSSIRDPDSEVREK 10
           + P    EECSS+   + E  E+
Sbjct: 235 EYP---LEECSSMSISEPEFNEE 254


>ref|XP_004152357.1| PREDICTED: uncharacterized protein LOC101212915 [Cucumis sativus]
           gi|449528217|ref|XP_004171102.1| PREDICTED:
           uncharacterized LOC101212915 [Cucumis sativus]
          Length = 270

 Score =  144 bits (362), Expect = 1e-32
 Identities = 81/132 (61%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
 Frame = -1

Query: 426 PCSPHRHQRPHNGTASSS--YTSLGCNLTSVACS-QPRQRGSDSEGRFPSSPSDICHSAD 256
           P SP+R+QRP +G A S+   TSLGC+ TS   S QP QRGSDSEGRFPSSPSDICHSAD
Sbjct: 119 PVSPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSAD 178

Query: 255 LRRAALLRSVQMRVQPPALPSFELAFSPDQEPMQNMEPEDQPCSCGKSIVQECSCQNQQQ 76
           LRRAALLRSVQMR QPP   S EL +    EP  N+E ED+PCSC KS+V E   Q    
Sbjct: 179 LRRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQ---- 234

Query: 75  IPDLFAEECSSI 40
                 EECSS+
Sbjct: 235 -----LEECSSM 241


>gb|AAX47176.1| expressed protein [Pisum sativum]
          Length = 265

 Score =  143 bits (360), Expect = 2e-32
 Identities = 79/139 (56%), Positives = 92/139 (66%), Gaps = 4/139 (2%)
 Frame = -1

Query: 426 PCSPHRHQRPHNGTASSSYTSL----GCNLTSVACSQPRQRGSDSEGRFPSSPSDICHSA 259
           P SP R+QR  N  +S+  TSL    G  +++V CSQPRQR SDS+GRFPSSPSDICHSA
Sbjct: 113 PVSPCRYQRQQNSFSSAPSTSLNTSHGFPVSAVTCSQPRQRSSDSDGRFPSSPSDICHSA 172

Query: 258 DLRRAALLRSVQMRVQPPALPSFELAFSPDQEPMQNMEPEDQPCSCGKSIVQECSCQNQQ 79
           DLRRAALLRSVQMR  PP   S EL F   QEP  N++ ED+PCS  KS+V E       
Sbjct: 173 DLRRAALLRSVQMRTHPPGSASLELPFGSGQEPAPNIDSEDRPCSYMKSLVDE------- 225

Query: 78  QIPDLFAEECSSIRDPDSE 22
              D   EECSSI  P++E
Sbjct: 226 --RDYQIEECSSIGAPETE 242


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