BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034052
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like ...   242   3e-62
gb|ADN33828.1| polygalacturonase [Cucumis melo subsp. melo]           230   1e-58
ref|XP_004155404.1| PREDICTED: polygalacturonase At1g48100-like ...   229   1e-58
ref|XP_004135250.1| PREDICTED: polygalacturonase At1g48100-like ...   229   1e-58
ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Viti...   228   5e-58

>ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
          Length = 505

 Score =  242 bits (617), Expect = 3e-62
 Identities = 110/169 (65%), Positives = 135/169 (79%), Gaps = 3/169 (1%)
 Frame = +3

Query: 18  PPSYTGPKKKNP---TPPAKGDNGRNSAIFNVLKFGAKGDGNVDDTKAFETAWAAACKVK 188
           PPS   PK K     TPP KG +  +SAIFNVL FGAKG+G  DDTKAFE AWA ACKV+
Sbjct: 60  PPSPLPPKPKEEIVQTPPKKGPSAGDSAIFNVLDFGAKGNGETDDTKAFEDAWAEACKVE 119

Query: 189 ASTVLVPSDYVFLVGPVSFSGPYCQPDIVFQLDGTIIAPTDFKVWGSGLFQWLLFTKLIG 368
            STV+VP+DYVF VGP+SFSGPYCQPDI+FQLDGTIIAPTD + WG GL QW+ FTKL+G
Sbjct: 120 GSTVMVPADYVFFVGPISFSGPYCQPDIIFQLDGTIIAPTDHQTWGKGLLQWIQFTKLVG 179

Query: 369 ITVQGRGTIDGRGTIWWKDSPLDDPIDDETKMLVPITNTTIDDSSHTPM 515
           IT++G G IDGRG++WW+DS  D+PIDDE K+++P+ N TI+++  TP+
Sbjct: 180 ITIRGNGIIDGRGSVWWQDSSFDEPIDDEMKLIIPV-NNTINETKPTPI 227


>gb|ADN33828.1| polygalacturonase [Cucumis melo subsp. melo]
          Length = 530

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/170 (64%), Positives = 129/170 (75%), Gaps = 1/170 (0%)
 Frame = +3

Query: 6   PKSPPPSYTGPKKKNPTPPAKGDNGRNSAIFNVLKFGAKGDGNVDDTKAFETAWAAACKV 185
           P+  P   T PK   P  P     G +S +FNVL FGAKGDG  DDTKAF+  W A+CKV
Sbjct: 85  PQPLPRPVTKPKPNIPRSPPP-QKGGHSFMFNVLDFGAKGDGKTDDTKAFQDTWTASCKV 143

Query: 186 KASTVLVPSDYVFLVGPVSFSGPYCQPDIVFQLDGTIIAPTDFKVWGSGLFQWLLFTKLI 365
            AST +VPS YVFLVGP+SFSGPYCQPDIVFQLDGTIIAPTDFKVWG GL QWL FTKL+
Sbjct: 144 AASTFIVPSKYVFLVGPISFSGPYCQPDIVFQLDGTIIAPTDFKVWGKGLLQWLQFTKLM 203

Query: 366 GITVQGRGTIDGRGTIWWKD-SPLDDPIDDETKMLVPITNTTIDDSSHTP 512
           G+T+QG G IDGRG++WW++ SP DDPIDDE K+L+P+ N+T+ +    P
Sbjct: 204 GLTIQGNGVIDGRGSVWWQEISPYDDPIDDEFKLLIPL-NSTVQEKPPAP 252


>ref|XP_004155404.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
          Length = 342

 Score =  229 bits (585), Expect = 1e-58
 Identities = 109/170 (64%), Positives = 129/170 (75%), Gaps = 1/170 (0%)
 Frame = +3

Query: 6   PKSPPPSYTGPKKKNPTPPAKGDNGRNSAIFNVLKFGAKGDGNVDDTKAFETAWAAACKV 185
           P+  P   T PK   P  P     G +S +FNVL FGAKGDG  DDTKAF+  W A+CKV
Sbjct: 85  PQPLPRPVTKPKPNIPRSPPPQKEG-HSIMFNVLDFGAKGDGKTDDTKAFQDTWTASCKV 143

Query: 186 KASTVLVPSDYVFLVGPVSFSGPYCQPDIVFQLDGTIIAPTDFKVWGSGLFQWLLFTKLI 365
            AST +VPS YVFLVGP+SFSGPYCQPDIVFQLDGTIIAPTDFKVWG GL QWL FTKL+
Sbjct: 144 AASTFIVPSKYVFLVGPISFSGPYCQPDIVFQLDGTIIAPTDFKVWGKGLLQWLQFTKLM 203

Query: 366 GITVQGRGTIDGRGTIWWKD-SPLDDPIDDETKMLVPITNTTIDDSSHTP 512
           G+T+QG G IDGRG++WW++ SP DDPIDDE K+L+P+ N+T+ +    P
Sbjct: 204 GLTIQGNGVIDGRGSVWWQEISPYDDPIDDEFKLLIPL-NSTVQEKPPPP 252


>ref|XP_004135250.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
          Length = 530

 Score =  229 bits (585), Expect = 1e-58
 Identities = 109/170 (64%), Positives = 129/170 (75%), Gaps = 1/170 (0%)
 Frame = +3

Query: 6   PKSPPPSYTGPKKKNPTPPAKGDNGRNSAIFNVLKFGAKGDGNVDDTKAFETAWAAACKV 185
           P+  P   T PK   P  P     G +S +FNVL FGAKGDG  DDTKAF+  W A+CKV
Sbjct: 85  PQPLPRPVTKPKPNIPRSPPPQKEG-HSIMFNVLDFGAKGDGKTDDTKAFQDTWTASCKV 143

Query: 186 KASTVLVPSDYVFLVGPVSFSGPYCQPDIVFQLDGTIIAPTDFKVWGSGLFQWLLFTKLI 365
            AST +VPS YVFLVGP+SFSGPYCQPDIVFQLDGTIIAPTDFKVWG GL QWL FTKL+
Sbjct: 144 AASTFIVPSKYVFLVGPISFSGPYCQPDIVFQLDGTIIAPTDFKVWGKGLLQWLQFTKLM 203

Query: 366 GITVQGRGTIDGRGTIWWKD-SPLDDPIDDETKMLVPITNTTIDDSSHTP 512
           G+T+QG G IDGRG++WW++ SP DDPIDDE K+L+P+ N+T+ +    P
Sbjct: 204 GLTIQGNGVIDGRGSVWWQEISPYDDPIDDEFKLLIPL-NSTVQEKPPPP 252


>ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
           gi|297739064|emb|CBI28553.3| unnamed protein product
           [Vitis vinifera]
          Length = 505

 Score =  228 bits (580), Expect = 5e-58
 Identities = 105/171 (61%), Positives = 137/171 (80%), Gaps = 1/171 (0%)
 Frame = +3

Query: 9   KSPPPSYTGPKKK-NPTPPAKGDNGRNSAIFNVLKFGAKGDGNVDDTKAFETAWAAACKV 185
           KS P + + PK++  P PP K    + S  FNVL FGAKGDG+ DDTKAF++AWA+ACKV
Sbjct: 64  KSKPKAPSPPKQEVTPPPPEK----KGSETFNVLDFGAKGDGDTDDTKAFQSAWASACKV 119

Query: 186 KASTVLVPSDYVFLVGPVSFSGPYCQPDIVFQLDGTIIAPTDFKVWGSGLFQWLLFTKLI 365
           +AST++VPS+YVFLVGP+SFSGPYC+ +IVFQLDGTIIAPT+ K WGSGL  W+ FTKL 
Sbjct: 120 EASTIVVPSEYVFLVGPISFSGPYCEANIVFQLDGTIIAPTNAKAWGSGLLWWIEFTKLR 179

Query: 366 GITVQGRGTIDGRGTIWWKDSPLDDPIDDETKMLVPITNTTIDDSSHTPMN 518
           GIT++G G IDG+G++WW+DSP DDP+DDE K+++P+ N T  ++S  P+N
Sbjct: 180 GITIRGNGVIDGKGSVWWQDSPFDDPVDDEAKLIIPL-NRTAKENSPIPIN 229