BLASTX nr result

ID: Coptis25_contig00034043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034043
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282629.2| PREDICTED: probable L-type lectin-domain con...   144   1e-32
ref|XP_002324854.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002515529.1| conserved hypothetical protein [Ricinus comm...   124   8e-27
ref|XP_002525166.1| carbohydrate binding protein, putative [Rici...   119   2e-25
ref|XP_002323460.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25

>ref|XP_002282629.2| PREDICTED: probable L-type lectin-domain containing receptor kinase
           S.7-like [Vitis vinifera]
          Length = 661

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/96 (69%), Positives = 78/96 (81%)
 Frame = -2

Query: 296 GTPGYLAPECTYTGKATPESDAFSYGIVVLEVVCGRRSMGGIGQNNLVDYVWNLHGKGEL 117
           GTPGYLAPE  +TGKATP+SD +S+G+VVLEVVCGRRS G   + +LVDYVW LHGK  L
Sbjct: 501 GTPGYLAPEVGFTGKATPDSDVYSFGMVVLEVVCGRRSRGITEETSLVDYVWILHGKDAL 560

Query: 116 LQCVDSKLGGKFDEEEIKRVLAVGLACSHPDPLFRP 9
           LQCVDS L G+FDEE++KR L VGLAC HPD + RP
Sbjct: 561 LQCVDSMLKGEFDEEQVKRTLVVGLACLHPDFMLRP 596


>ref|XP_002324854.1| predicted protein [Populus trichocarpa] gi|222866288|gb|EEF03419.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/96 (63%), Positives = 76/96 (79%)
 Frame = -2

Query: 296 GTPGYLAPECTYTGKATPESDAFSYGIVVLEVVCGRRSMGGIGQNNLVDYVWNLHGKGEL 117
           GTPGYLAPE  YTGKA PESD +S+G+VV+EVV G+RS G   +N+L+DYVW+LHG+  L
Sbjct: 179 GTPGYLAPEVAYTGKAAPESDVYSFGMVVIEVVTGQRSRGIFEENSLLDYVWSLHGRKTL 238

Query: 116 LQCVDSKLGGKFDEEEIKRVLAVGLACSHPDPLFRP 9
           L+ VD KL GK+DE+++KR L VGLAC HPD   RP
Sbjct: 239 LEGVDRKLEGKYDEQQVKRTLLVGLACLHPDTKSRP 274


>ref|XP_002515529.1| conserved hypothetical protein [Ricinus communis]
           gi|223545473|gb|EEF46978.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 584

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/96 (59%), Positives = 73/96 (76%)
 Frame = -2

Query: 293 TPGYLAPECTYTGKATPESDAFSYGIVVLEVVCGRRSMGGIGQNNLVDYVWNLHGKGELL 114
           TPGYLAPE  Y+GKATPESD +S+G++V+EVV GRRS G   +N+L++Y W+LH K  L+
Sbjct: 423 TPGYLAPEVGYSGKATPESDVYSFGMIVIEVVSGRRSKGVFEENSLLNYFWSLHEKNALI 482

Query: 113 QCVDSKLGGKFDEEEIKRVLAVGLACSHPDPLFRPE 6
           + VD  L G  DE+E+KR L VGLAC  PDP FRP+
Sbjct: 483 EGVDKMLQGTCDEQEVKRALIVGLACLRPDPNFRPK 518


>ref|XP_002525166.1| carbohydrate binding protein, putative [Ricinus communis]
           gi|223535463|gb|EEF37132.1| carbohydrate binding
           protein, putative [Ricinus communis]
          Length = 627

 Score =  119 bits (299), Expect = 2e-25
 Identities = 62/104 (59%), Positives = 75/104 (72%), Gaps = 8/104 (7%)
 Frame = -2

Query: 296 GTPGYLAPECTYTGKATPESDAFSYGIVVLEVVCGRR-------SMGGIGQN-NLVDYVW 141
           GT GYLAPE   TG+AT ++D FSYG VVLEV  GRR        +G +G N NLV++VW
Sbjct: 458 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVGSGRRPIEKETTGVGKVGANSNLVEWVW 517

Query: 140 NLHGKGELLQCVDSKLGGKFDEEEIKRVLAVGLACSHPDPLFRP 9
           +LH +G LL   DS+L G+FDE E++RVL VGLACSHPDPL RP
Sbjct: 518 SLHREGRLLVAADSRLEGEFDENEMRRVLLVGLACSHPDPLARP 561


>ref|XP_002323460.1| predicted protein [Populus trichocarpa] gi|222868090|gb|EEF05221.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/104 (57%), Positives = 74/104 (71%), Gaps = 8/104 (7%)
 Frame = -2

Query: 296 GTPGYLAPECTYTGKATPESDAFSYGIVVLEVVCGRRSM----GGIGQ----NNLVDYVW 141
           GT GYLAPE   TG+AT ++D FSYG VVLEV  GRR +     G+G+     NLV++VW
Sbjct: 489 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKETSGVGKVTLNGNLVEWVW 548

Query: 140 NLHGKGELLQCVDSKLGGKFDEEEIKRVLAVGLACSHPDPLFRP 9
           NLH +G LL   D +L G+FDE E++RVL VGLACSHPDP+ RP
Sbjct: 549 NLHREGRLLAAADDRLEGQFDESEMRRVLLVGLACSHPDPMARP 592


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