BLASTX nr result

ID: Coptis25_contig00034036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034036
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69337.1| hypothetical protein VITISV_032631 [Vitis vinifera]   114   8e-24
gb|AAQ63971.1| unknown [Nicotiana benthamiana]                        114   1e-23
ref|XP_002531277.1| ankyrin repeat-containing protein, putative ...   112   2e-23
ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296...   112   4e-23
ref|XP_002319644.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23

>emb|CAN69337.1| hypothetical protein VITISV_032631 [Vitis vinifera]
          Length = 433

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/116 (52%), Positives = 78/116 (67%)
 Frame = +1

Query: 7   GRTNICNYLIEELKLDPDQKDGRDCTPLSYASAAGHLSTVAYLIDNGADPTALNRQNLTA 186
           GRT +C YL+EELKLD D KD    TPL +A+  GH  T  YL+D+GADP   +    TA
Sbjct: 66  GRTEVCKYLLEELKLDVDAKDEDGETPLLHAARQGHTVTAKYLLDHGADPAIPSDLGATA 125

Query: 187 LHIAVKMGNIELIEFLFSKGVDVNAPSESDAGTPLQVATTCCREDVLKVLLDHGAN 354
           LH +  +G+IEL+ FL SKGVD++  S+SDAGTPL  A    + D +KVLL+H AN
Sbjct: 126 LHHSAGIGDIELLRFLLSKGVDID--SQSDAGTPLIWAAGHGQHDAVKVLLEHHAN 179


>gb|AAQ63971.1| unknown [Nicotiana benthamiana]
          Length = 469

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/116 (50%), Positives = 79/116 (68%)
 Frame = +1

Query: 7   GRTNICNYLIEELKLDPDQKDGRDCTPLSYASAAGHLSTVAYLIDNGADPTALNRQNLTA 186
           G+T  C +L+EELKLD + KD    TP+ +A+  GH +TV YLI+ GADP   +    TA
Sbjct: 66  GQTAFCEFLVEELKLDVNTKDEEGETPVLHAARQGHTATVQYLIEQGADPATPSTSGATA 125

Query: 187 LHIAVKMGNIELIEFLFSKGVDVNAPSESDAGTPLQVATTCCREDVLKVLLDHGAN 354
           LH A  MG++E+++FL SKGVDV+  S+S AGTPL  A    +ED +KVLL+H AN
Sbjct: 126 LHHAAGMGHVEVVKFLLSKGVDVD--SQSGAGTPLIWAAGLAQEDAVKVLLEHHAN 179


>ref|XP_002531277.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223529110|gb|EEF31090.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 463

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/116 (50%), Positives = 79/116 (68%)
 Frame = +1

Query: 7   GRTNICNYLIEELKLDPDQKDGRDCTPLSYASAAGHLSTVAYLIDNGADPTALNRQNLTA 186
           G+T +C YL+E+LKLD D KD    TPL +A+  GH +T  YL+++GA+P   +    TA
Sbjct: 66  GKTEVCKYLLEDLKLDVDTKDDDGETPLIHAARQGHTATAMYLLEHGANPAVASDLGATA 125

Query: 187 LHIAVKMGNIELIEFLFSKGVDVNAPSESDAGTPLQVATTCCREDVLKVLLDHGAN 354
           LH +  +GNIEL+ +L SKGV+V+  S+SDAGTPL  A    + D LKVLL+H AN
Sbjct: 126 LHHSAGIGNIELLRYLLSKGVEVD--SQSDAGTPLIWAAGHAQPDALKVLLEHHAN 179


>ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296087918|emb|CBI35201.3|
           unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  112 bits (279), Expect = 4e-23
 Identities = 60/116 (51%), Positives = 77/116 (66%)
 Frame = +1

Query: 7   GRTNICNYLIEELKLDPDQKDGRDCTPLSYASAAGHLSTVAYLIDNGADPTALNRQNLTA 186
           GRT +C YL+EELKLD D KD    TPL +A+  GH  T  YL+D+ ADP   +    TA
Sbjct: 66  GRTEVCKYLLEELKLDVDAKDEDGETPLLHAARQGHTVTAKYLLDHSADPAIPSDLGATA 125

Query: 187 LHIAVKMGNIELIEFLFSKGVDVNAPSESDAGTPLQVATTCCREDVLKVLLDHGAN 354
           LH +  +G+IEL+ FL SKGVD++  S+SDAGTPL  A    + D +KVLL+H AN
Sbjct: 126 LHHSAGIGDIELLRFLLSKGVDID--SQSDAGTPLIWAAGHGQHDAVKVLLEHHAN 179


>ref|XP_002319644.1| predicted protein [Populus trichocarpa] gi|222858020|gb|EEE95567.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/116 (50%), Positives = 78/116 (67%)
 Frame = +1

Query: 7   GRTNICNYLIEELKLDPDQKDGRDCTPLSYASAAGHLSTVAYLIDNGADPTALNRQNLTA 186
           G+T +C YLIEELKLD D KD    TP+ +A+  GH +T  YL+D GA+P   +    TA
Sbjct: 58  GQTEVCKYLIEELKLDVDTKDEDGETPIIHAARQGHTATAKYLLDQGANPVMRSDVGATA 117

Query: 187 LHIAVKMGNIELIEFLFSKGVDVNAPSESDAGTPLQVATTCCREDVLKVLLDHGAN 354
           LH +  +GN EL+E+L SKG +V+  S+SDAGTPL  A    ++D LKVLL+H AN
Sbjct: 118 LHHSAGIGNNELMEYLLSKGAEVD--SQSDAGTPLIWAAGHGQQDALKVLLEHHAN 171



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/118 (30%), Positives = 55/118 (46%)
 Frame = +1

Query: 1   GTGRTNICNYLIEELKLDPDQKDGRDCTPLSYASAAGHLSTVAYLIDNGADPTALNRQNL 180
           G G   +  YL+ +      Q D    TPL +A+  G    +  L+++ A+P A     +
Sbjct: 123 GIGNNELMEYLLSKGAEVDSQSDAG--TPLIWAAGHGQQDALKVLLEHHANPNAETEDGV 180

Query: 181 TALHIAVKMGNIELIEFLFSKGVDVNAPSESDAGTPLQVATTCCREDVLKVLLDHGAN 354
           T L  AV  G++  +E L   G DVN    S   TPL +A      ++L  LL+ GA+
Sbjct: 181 TPLLSAVAAGSLTCLELLVQAGADVNV--ASGGATPLHIAADIGSPEILNCLLEAGAD 236


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