BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034032
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein lig...   254   2e-65
ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein lig...   252   1e-64
ref|XP_002516824.1| conserved hypothetical protein [Ricinus comm...   250   4e-64
ref|XP_002314433.1| predicted protein [Populus trichocarpa] gi|2...   244   2e-62
ref|XP_004134170.1| PREDICTED: putative E3 ubiquitin-protein lig...   233   7e-59

>ref|XP_003542905.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Glycine
            max]
          Length = 883

 Score =  254 bits (649), Expect = 2e-65
 Identities = 143/277 (51%), Positives = 186/277 (67%)
 Frame = -2

Query: 980  ENALSRANRKFEETDAEVHELEGKNSKLRQEMEEAKKQCAEAAVSCKDVAKRENKMKKKL 801
            ENALS+A+ + E T+A+V +LE +N+ LR+EME AK Q AE+A SC++V++RE K + K 
Sbjct: 606  ENALSKASAQVERTNADVRKLEVENAALRKEMEVAKLQAAESATSCQEVSRREKKTQMKF 665

Query: 800  QSSENQKITLQEELAWVKCRQVKLEQEVGQAQKFXXXXXXXXXXXXXXXEDILMQAESIR 621
            QS E QK   QEEL   K +  +L+QE+ QA+                 E++L+QA SIR
Sbjct: 666  QSWEKQKSLFQEELMNEKHKLAQLQQELEQAKVQQQQVEARWQQAAKAKEELLLQASSIR 725

Query: 620  KEREHIEASAELEEHTVRSKSANGLQRYKDVIRDLGSQIAQLRFKIDPSKLAALHWGADG 441
            KERE IE SA+ +E  ++ K+   L RY+D I+ L  +IAQLR K D SK+AAL  G DG
Sbjct: 726  KEREQIEESAKSKEDMIKLKAEENLHRYRDDIQKLEKEIAQLRQKTDSSKIAALRRGIDG 785

Query: 440  SNVSCLSGGGIAQHMEGSRQTFLASDLNPVFQDNLQTGRVKRERECVMCLTEEMSVVFLP 261
            + VS       +  ++ SR TF+ S++     D    G VKRERECVMCL+EEMSVVFLP
Sbjct: 786  NYVSSFMDVK-SMALKESRATFI-SEMVSNLNDYSLIGGVKRERECVMCLSEEMSVVFLP 843

Query: 260  CAHQVVCAKCNELHEKQGMKDCPSCRTPIQRRICTRF 150
            CAHQVVC  CN+LHEKQGM+DCPSCR+PIQRRI  RF
Sbjct: 844  CAHQVVCTTCNDLHEKQGMQDCPSCRSPIQRRISVRF 880


>ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Vitis
            vinifera]
          Length = 893

 Score =  252 bits (643), Expect = 1e-64
 Identities = 142/277 (51%), Positives = 179/277 (64%)
 Frame = -2

Query: 980  ENALSRANRKFEETDAEVHELEGKNSKLRQEMEEAKKQCAEAAVSCKDVAKRENKMKKKL 801
            ENAL +A+ + E  +A V  LE +NS LRQEME AK + AE+A SC++V+KRE K   K 
Sbjct: 615  ENALGKASGQVERANAAVRRLEVENSSLRQEMEAAKLEAAESAASCQEVSKREKKTLMKF 674

Query: 800  QSSENQKITLQEELAWVKCRQVKLEQEVGQAQKFXXXXXXXXXXXXXXXEDILMQAESIR 621
            Q+ E QK    EEL   K R  +L QE+ QA +                E++LMQA S R
Sbjct: 675  QTWEKQKAFFHEELTSEKRRLAQLRQELEQATELQDQLEARWKQEEKAKEELLMQASSTR 734

Query: 620  KEREHIEASAELEEHTVRSKSANGLQRYKDVIRDLGSQIAQLRFKIDPSKLAALHWGADG 441
            KERE IE SA+ +E  ++ K+   LQ+YKD I+ L  QI++LR K D SK+AAL  G DG
Sbjct: 735  KEREQIEVSAKSKEDMIKLKAEANLQKYKDDIQKLEKQISELRLKTDSSKIAALRRGIDG 794

Query: 440  SNVSCLSGGGIAQHMEGSRQTFLASDLNPVFQDNLQTGRVKRERECVMCLTEEMSVVFLP 261
            S  S L+        + S+  F+ S++   F +   +G VKRERECVMCL+EEMSVVFLP
Sbjct: 795  SYASRLTDTINGSAHKESQAPFI-SEMVTNFHNYAGSGGVKRERECVMCLSEEMSVVFLP 853

Query: 260  CAHQVVCAKCNELHEKQGMKDCPSCRTPIQRRICTRF 150
            CAHQVVC  CNELHEKQGMKDCPSCR+PIQRRI  R+
Sbjct: 854  CAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIRIRY 890


>ref|XP_002516824.1| conserved hypothetical protein [Ricinus communis]
            gi|223543912|gb|EEF45438.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 894

 Score =  250 bits (638), Expect = 4e-64
 Identities = 139/280 (49%), Positives = 182/280 (65%)
 Frame = -2

Query: 980  ENALSRANRKFEETDAEVHELEGKNSKLRQEMEEAKKQCAEAAVSCKDVAKRENKMKKKL 801
            ENAL +A+ + E  ++ V  LE +N+ LRQEME  K   AE+A SC++V+KRE     K 
Sbjct: 619  ENALCKASGQVERANSAVRRLEVENAALRQEMEAEKLNAAESAASCQEVSKREKNTLMKF 678

Query: 800  QSSENQKITLQEELAWVKCRQVKLEQEVGQAQKFXXXXXXXXXXXXXXXEDILMQAESIR 621
            QS E QKI LQEELA  K +  +L Q++ QA++                E++L+QA S+R
Sbjct: 679  QSWEKQKIILQEELATEKRKVAQLRQDLEQAKQLQEQHEARWQQEEKAKEELLLQANSMR 738

Query: 620  KEREHIEASAELEEHTVRSKSANGLQRYKDVIRDLGSQIAQLRFKIDPSKLAALHWGADG 441
            KERE IE +A+ +E T++ K+   LQ+YKD I+ L  +IAQLR K D SK+AAL  G + 
Sbjct: 739  KEREQIETAAKSKEDTIKLKAEINLQKYKDDIQKLEKEIAQLRLKTDSSKIAALRMGINQ 798

Query: 440  SNVSCLSGGGIAQHMEGSRQTFLASDLNPVFQDNLQTGRVKRERECVMCLTEEMSVVFLP 261
            S  S L+        + S   + ++D    F D  +TG VKRERECVMCL+EEMSVVFLP
Sbjct: 799  SYASRLTDIKYNIAQKESSPLYFSAD----FHDYSETGGVKRERECVMCLSEEMSVVFLP 854

Query: 260  CAHQVVCAKCNELHEKQGMKDCPSCRTPIQRRICTRFFQS 141
            CAHQVVC  CN+LHEKQGMKDCPSCR+ IQRRI  R+ +S
Sbjct: 855  CAHQVVCTTCNDLHEKQGMKDCPSCRSTIQRRISVRYARS 894


>ref|XP_002314433.1| predicted protein [Populus trichocarpa] gi|222863473|gb|EEF00604.1|
            predicted protein [Populus trichocarpa]
          Length = 736

 Score =  244 bits (624), Expect = 2e-62
 Identities = 139/280 (49%), Positives = 179/280 (63%)
 Frame = -2

Query: 980  ENALSRANRKFEETDAEVHELEGKNSKLRQEMEEAKKQCAEAAVSCKDVAKRENKMKKKL 801
            ENAL +A+ K E  ++ V  LE +N+ LRQEME AK + AE+A SC++V+KRE K   K 
Sbjct: 476  ENALCKASGKVERANSAVRRLEVENAVLRQEMETAKLRAAESAASCQEVSKREKKTLMKF 535

Query: 800  QSSENQKITLQEELAWVKCRQVKLEQEVGQAQKFXXXXXXXXXXXXXXXEDILMQAESIR 621
            QS E QK  LQEE A  + + ++L Q++ +A++                E++LMQA + R
Sbjct: 536  QSWEKQKTLLQEEFATERRKFLELLQDLERAKQIQEQHEARWRQEEKEKEEVLMQASATR 595

Query: 620  KEREHIEASAELEEHTVRSKSANGLQRYKDVIRDLGSQIAQLRFKIDPSKLAALHWGADG 441
            KERE+IEASA+ +E  ++ K+   LQ+YKD I+ L  +I+QLR K D SK+AAL  G DG
Sbjct: 596  KERENIEASAKSKEDMIKLKAETNLQKYKDDIQKLEKEISQLRLKTDSSKIAALRRGIDG 655

Query: 440  SNVSCLSGGGIAQHMEGSRQTFLASDLNPVFQDNLQTGRVKRERECVMCLTEEMSVVFLP 261
            S  S L+                  D+   F D  + G VKRERECVMCL+EEMSVVFLP
Sbjct: 656  SYASRLA------------------DIKN-FHDYFEMGGVKRERECVMCLSEEMSVVFLP 696

Query: 260  CAHQVVCAKCNELHEKQGMKDCPSCRTPIQRRICTRFFQS 141
            CAHQVVC  CNELHEKQGMKDCPSCR PIQ RI  R+ +S
Sbjct: 697  CAHQVVCTTCNELHEKQGMKDCPSCRGPIQLRIPVRYARS 736


>ref|XP_004134170.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Cucumis
            sativus]
          Length = 901

 Score =  233 bits (593), Expect = 7e-59
 Identities = 132/280 (47%), Positives = 181/280 (64%)
 Frame = -2

Query: 980  ENALSRANRKFEETDAEVHELEGKNSKLRQEMEEAKKQCAEAAVSCKDVAKRENKMKKKL 801
            E+AL +A+ + E  ++ V  LE +N+ LRQ+ME AK +  E+A S ++V+KRE K   K+
Sbjct: 623  EHALCKASGQVELANSAVRRLEVENAALRQDMEVAKLRATESAASYQEVSKREKKTLMKV 682

Query: 800  QSSENQKITLQEELAWVKCRQVKLEQEVGQAQKFXXXXXXXXXXXXXXXEDILMQAESIR 621
            QS E QK+  QEE    K +  KL QE+ QA+                 +++L+QA S+R
Sbjct: 683  QSWEKQKMLFQEEHTEEKRKVKKLIQELEQARDLQEQLEGRWKLEERAKDELLVQAASLR 742

Query: 620  KEREHIEASAELEEHTVRSKSANGLQRYKDVIRDLGSQIAQLRFKIDPSKLAALHWGADG 441
            KERE IE S +++E T++ K+ N L +YKD I+ L  +I+ LR K D S++AAL  G DG
Sbjct: 743  KEREQIEDSVKVKEDTIKLKAENNLIKYKDDIQKLEKEISVLRLKTDSSRIAALKRGIDG 802

Query: 440  SNVSCLSGGGIAQHMEGSRQTFLASDLNPVFQDNLQTGRVKRERECVMCLTEEMSVVFLP 261
            S  S L+        + S    ++  +  +++ +  TG VKRERECVMCL+EEMSVVFLP
Sbjct: 803  SYASRLTDTRNNTDHKESWSPNVSESMKDLYKYS-GTGGVKRERECVMCLSEEMSVVFLP 861

Query: 260  CAHQVVCAKCNELHEKQGMKDCPSCRTPIQRRICTRFFQS 141
            CAHQVVC  CNELHEKQGMKDCPSCR+PIQRRI  R+ +S
Sbjct: 862  CAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIPVRYARS 901