BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034026
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27495.3| unnamed protein product [Vitis vinifera]              142   4e-32
ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi...   141   6e-32
emb|CBI24106.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30

>emb|CBI27495.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  142 bits (357), Expect = 4e-32
 Identities = 74/138 (53%), Positives = 100/138 (72%)
 Frame = +2

Query: 11  YCQIMEAYGKIGDTDKVLSLFKEFASKDLQLSSTSTQIFSILCDSLGKSSRGFEALELFR 190
           Y +IMEAY KI D +KV++LF+EF S+ +  S  STQI+ ILC+SLGK  R FEALE FR
Sbjct: 162 YYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFR 221

Query: 191 ELTGKGIVENXXXXXXXXXXXXXXGEVKVAEQLFAEAKEKNMVKDPALFLKLVLMYVKEG 370
           ++T KGI+E+               EVKVAE+LF EA+EK +++DP +FLKLVLMYV+EG
Sbjct: 222 DMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEG 281

Query: 371 PIQTSLEIVQAMKGLNIK 424
            ++ +LEIV+AMK + I+
Sbjct: 282 LMERTLEIVKAMKNVEIR 299


>ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 603

 Score =  142 bits (357), Expect = 4e-32
 Identities = 74/138 (53%), Positives = 100/138 (72%)
 Frame = +2

Query: 11  YCQIMEAYGKIGDTDKVLSLFKEFASKDLQLSSTSTQIFSILCDSLGKSSRGFEALELFR 190
           Y +IMEAY KI D +KV++LF+EF S+ +  S  STQI+ ILC+SLGK  R FEALE FR
Sbjct: 224 YYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFR 283

Query: 191 ELTGKGIVENXXXXXXXXXXXXXXGEVKVAEQLFAEAKEKNMVKDPALFLKLVLMYVKEG 370
           ++T KGI+E+               EVKVAE+LF EA+EK +++DP +FLKLVLMYV+EG
Sbjct: 284 DMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEG 343

Query: 371 PIQTSLEIVQAMKGLNIK 424
            ++ +LEIV+AMK + I+
Sbjct: 344 LMERTLEIVKAMKNVEIR 361


>ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 609

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/138 (52%), Positives = 100/138 (72%)
 Frame = +2

Query: 11  YCQIMEAYGKIGDTDKVLSLFKEFASKDLQLSSTSTQIFSILCDSLGKSSRGFEALELFR 190
           Y +IMEAY KI D +KV++LF+EF S+ +  S  STQI+ ILC+SLGK  R FEALE FR
Sbjct: 225 YYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFR 284

Query: 191 ELTGKGIVENXXXXXXXXXXXXXXGEVKVAEQLFAEAKEKNMVKDPALFLKLVLMYVKEG 370
           ++T KGI+E+               EVKVAE+LF EA+EK +++DP +FLKLVLMYV+EG
Sbjct: 285 DMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEG 344

Query: 371 PIQTSLEIVQAMKGLNIK 424
            ++ ++EIV+AMK + I+
Sbjct: 345 LMERTIEIVKAMKNVKIR 362


>emb|CBI24106.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/138 (52%), Positives = 100/138 (72%)
 Frame = +2

Query: 11  YCQIMEAYGKIGDTDKVLSLFKEFASKDLQLSSTSTQIFSILCDSLGKSSRGFEALELFR 190
           Y +IMEAY KI D +KV++LF+EF S+ +  S  STQI+ ILC+SLGK  R FEALE FR
Sbjct: 148 YYRIMEAYIKIRDYEKVVTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFR 207

Query: 191 ELTGKGIVENXXXXXXXXXXXXXXGEVKVAEQLFAEAKEKNMVKDPALFLKLVLMYVKEG 370
           ++T KGI+E+               EVKVAE+LF EA+EK +++DP +FLKLVLMYV+EG
Sbjct: 208 DMTKKGILEDSAVYSSLICSFASIREVKVAEELFREAEEKKILRDPEVFLKLVLMYVEEG 267

Query: 371 PIQTSLEIVQAMKGLNIK 424
            ++ ++EIV+AMK + I+
Sbjct: 268 LMERTIEIVKAMKNVKIR 285


>ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Cucumis sativus]
          Length = 608

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/140 (47%), Positives = 96/140 (68%)
 Frame = +2

Query: 2   AGCYCQIMEAYGKIGDTDKVLSLFKEFASKDLQLSSTSTQIFSILCDSLGKSSRGFEALE 181
           +GCYC++MEAY K+GD+++V+ LF E  S+    +  ST+I+ ILC+SL KS R FE+LE
Sbjct: 222 SGCYCRVMEAYLKLGDSERVMELFNEVESRISDSTPFSTKIYGILCESLAKSGRVFESLE 281

Query: 182 LFRELTGKGIVENXXXXXXXXXXXXXXGEVKVAEQLFAEAKEKNMVKDPALFLKLVLMYV 361
            FR++  KGI E+               EVK+AE L+ EAK K +++DPA+FLKL+LMYV
Sbjct: 282 FFRDMRKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKLILMYV 341

Query: 362 KEGPIQTSLEIVQAMKGLNI 421
           ++G ++ +LEIV+ MK   I
Sbjct: 342 QQGSLEKALEIVEVMKDFKI 361