BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033998
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   108   3e-21
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   106   1e-20
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    99   3e-18
ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc...    94   8e-17
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    93   1e-16

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  108 bits (269), Expect = 3e-21
 Identities = 70/214 (32%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
 Frame = -3

Query: 1114 SCNGLVFSAIQPY----FISNPVTGEYIVIPKPPRYAHVDVVTGFGFDPVSKVFKIIRII 947
            SCNGL+  +   Y    +I NP TG Y  +PK  +Y   +VV+GFGF+P +K +K+IRI+
Sbjct: 127  SCNGLLCLSDSLYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIV 186

Query: 946  QDTEEFE------------TSAEVYNVGTGKWRLISKVPYSFKGTKSNVFVNGALHWIGS 803
                               +  ++  +G  +WR + KV Y      S   VNG LHWI  
Sbjct: 187  YYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLGKVSYRLVRRASGALVNGRLHWISR 246

Query: 802  PCVKTMDSEVIVSFKLDTEEFQQVXXXXXXXXXXXXXSHFLSDLFASILRRFSQYLAVLD 623
            PC +   +  +VSF L  E+F++V                 S      L R + +L VL 
Sbjct: 247  PC-RNKPARRLVSFDLTDEQFREV-----------------SKPDCGGLNRCNYHLVVLR 288

Query: 622  ECLCIVRTFNNENIEIWMMKEYGFWSSWVSKYTV 521
             CL      N   +EIW+MKEY    SWV +Y +
Sbjct: 289  GCLSAAVYCNYGRLEIWVMKEYNVKESWVKEYNI 322


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  106 bits (264), Expect = 1e-20
 Identities = 67/214 (31%), Positives = 97/214 (45%), Gaps = 16/214 (7%)
 Frame = -3

Query: 1114 SCNGLVFSAIQPY----FISNPVTGEYIVIPKPPRYAHVDVVTGFGFDPVSKVFKIIRII 947
            SCNGL+  +   +    +I NP TG Y  +PK  +Y   +VV GFGF+P +  +K+IRI+
Sbjct: 126  SCNGLLCLSDSLFNDSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNEYKVIRIV 185

Query: 946  QDTEEFE------------TSAEVYNVGTGKWRLISKVPYSFKGTKSNVFVNGALHWIGS 803
                               +  ++  +G   WR + KV Y      S   VNG LHW+  
Sbjct: 186  YYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLVRRASETLVNGRLHWVSR 245

Query: 802  PCVKTMDSEVIVSFKLDTEEFQQVXXXXXXXXXXXXXSHFLSDLFASILRRFSQYLAVLD 623
            PC +   +  +VSF L  E+F++V                        L R   +LAVL 
Sbjct: 246  PC-RNKPARRLVSFDLTDEQFREVPKPDCGG-----------------LNRCDYHLAVLR 287

Query: 622  ECLCIVRTFNNENIEIWMMKEYGFWSSWVSKYTV 521
             CL +    N   +EIW+MKEY    SWV +Y +
Sbjct: 288  GCLSVAVYCNYGRLEIWVMKEYNVKESWVKEYNI 321


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
 Frame = -3

Query: 1114 SCNGLVFSAIQPY----FISNPVTGEYIVIPKPPRYAHVDVVTGFGFDPVSKVFKIIRII 947
            SCNGL+  A   +    ++ NP T ++  +PK  +Y   +VV GFG+ P+++V+K+++++
Sbjct: 127  SCNGLLCLADSLFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEVYKVVKVV 186

Query: 946  QDTEEF------------ETSAEVYNVGTGKWRLISKVPYSFKGTKSNVFVNGALHWIGS 803
                 +            ++  +V  +G+  WR + KV Y      S   VNG LHW+  
Sbjct: 187  YYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKVSYQLDRWPSEALVNGRLHWVTR 246

Query: 802  PCVKTMDSEVIVSFKLDTEEFQQVXXXXXXXXXXXXXSHFLSDLFASILRRFSQYLAVLD 623
            P  +   +  IVSF L  E+F+++                        L R + +L VL 
Sbjct: 247  P--RRYVTRFIVSFDLADEQFREIPKPDCGG-----------------LSRCNYHLLVLG 287

Query: 622  ECLCIVRTFNNENIEIWMMKEYGFWSSWVSKYTV 521
             CL      +N  +E+W+MKEY    SW+ ++ +
Sbjct: 288  GCLSAAVHRSNGKLEVWVMKEYDVKESWIKEFNI 321


>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
            gi|449519392|ref|XP_004166719.1| PREDICTED: F-box protein
            At3g07870-like [Cucumis sativus]
          Length = 375

 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
 Frame = -3

Query: 1114 SCNGLVFSAIQPY----FISNPVTGEYIVIPKPPRYAHVDVVTGFGFDPVSKVFKIIRII 947
            SCNG +  +   Y    FI NP T +Y+ +PK   +++ DVV G GF P +K  KI++I+
Sbjct: 97   SCNGFLCLSDSLYNENLFIYNPFTRDYLELPKSKDFSNPDVVYGIGFHPQTKRLKILKIV 156

Query: 946  Q-------DTEEFETSAEVYNVGTGKWRLISKVPYSFKGTKSNVFVNGALHWIGSPCVKT 788
                          +  +V+ +GT  WR I ++ +     +S   +NG LHW+  P  + 
Sbjct: 157  YSKGFRRIQRRFHHSEVQVFTLGTSNWRSIGRIFHHLAQGQSPAAINGRLHWVSLP-RRH 215

Query: 787  MDSEVIVSFKLDTEEFQQVXXXXXXXXXXXXXSHFLSDLFASILRRFSQYLAVLDECLCI 608
                 IVSF L +EEF  +                        L R +  L  L++CL  
Sbjct: 216  YVGRTIVSFDLASEEFIDIPKPDY-----------------GSLSRCNFQLMNLNDCLSA 258

Query: 607  VRTFNNENIEIWMMKEYGFWSSWVSKYTV 521
            V   +   +EIW+M++YG   SWV  + +
Sbjct: 259  VVYCSYGKMEIWVMEQYGVKESWVKSFNI 287


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
            gi|222854763|gb|EEE92310.1| f-box family protein [Populus
            trichocarpa]
          Length = 396

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
 Frame = -3

Query: 1114 SCNGL--VFSAIQPYFISNPVTGEYIVIPKPP----RYAHVD----VVTGFGFDPVSKVF 965
            S NGL  + + +    + NP T ++ V+P  P    RY         V GFG+D V   +
Sbjct: 101  SVNGLLCISNVVDDIAVWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDY 160

Query: 964  KIIRIIQ----DTEEFETSAEVYNVGTGKWRLISKVPYSFKGTKSN-VFVNGALHWIGSP 800
            K++RI Q        FE+  +VY++    WR I  +PY      +N VF NGALHW+   
Sbjct: 161  KLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGE 220

Query: 799  CVKTMDSEVIVSFKLDTEEFQQVXXXXXXXXXXXXXSHFLSDLFASILRRFSQYLAVLDE 620
              ++  + ++V+  L  E++++V                         + F   L VL  
Sbjct: 221  NPESNVANIVVALDLGVEDYREVLQPEYKD------------------KNFYIDLGVLRG 262

Query: 619  CLCIVRTFNNENIEIWMMKEYGFWSSWVSKYTV 521
            CLC +  F  E +++WMMKEYG   SW   ++V
Sbjct: 263  CLCFLANFLGERVDVWMMKEYGVKESWTKLFSV 295