BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033992
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containi...   156   4e-36
emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]   156   4e-36
ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
ref|XP_002515415.1| pentatricopeptide repeat-containing protein,...   146   6e-33
gb|ADE77588.1| unknown [Picea sitchensis]                             126   6e-27

>ref|XP_002283354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 517

 Score =  156 bits (395), Expect = 4e-36
 Identities = 71/121 (58%), Positives = 91/121 (75%)
 Frame = -3

Query: 772 EHYSCMFDLLGRAGFLKNAFRLIETMPFEPGPTVWGALLGACVIHRDIEVGDIIAKRFAA 593
           EHY CM DLLGRAGFL  AF+LI+ MPFEPG ++ GALLGACVIH+D+E G+ +     +
Sbjct: 386 EHYGCMVDLLGRAGFLDPAFQLIKAMPFEPGESILGALLGACVIHQDLETGEKVINLITS 445

Query: 592 RIECLSDGEYVMLANLYASCGRWDEANRWRAMMHDLDINKTSGNSMIEVNGTMYKFLAGH 413
           +   +SDGE++M  NLYASCG+W EANRWR  M++  I KT+G S IEV+G  Y+FLAG 
Sbjct: 446 KAHHVSDGEFMMFVNLYASCGQWKEANRWRERMNESGIAKTAGGSTIEVDGKFYRFLAGD 505

Query: 412 L 410
           +
Sbjct: 506 I 506


>emb|CAN70487.1| hypothetical protein VITISV_008663 [Vitis vinifera]
          Length = 1302

 Score =  156 bits (395), Expect = 4e-36
 Identities = 71/121 (58%), Positives = 91/121 (75%)
 Frame = -3

Query: 772  EHYSCMFDLLGRAGFLKNAFRLIETMPFEPGPTVWGALLGACVIHRDIEVGDIIAKRFAA 593
            EHY CM DLLGRAGFL  AF+LI+ MPFEPG ++ GALLGACVIH+D+E G+ +     +
Sbjct: 1171 EHYGCMVDLLGRAGFLDPAFQLIKAMPFEPGESILGALLGACVIHQDLETGEKVIBLITS 1230

Query: 592  RIECLSDGEYVMLANLYASCGRWDEANRWRAMMHDLDINKTSGNSMIEVNGTMYKFLAGH 413
            +   +SDGE++M  NLYASCG+W EANRWR  M++  I KT+G S IEV+G  Y+FLAG 
Sbjct: 1231 KAHHVSDGEFMMFVNLYASCGQWKEANRWRERMNESGIAKTAGGSTIEVDGKFYRFLAGD 1290

Query: 412  L 410
            +
Sbjct: 1291 I 1291


>ref|XP_002309680.1| predicted protein [Populus trichocarpa] gi|222855656|gb|EEE93203.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  150 bits (380), Expect = 2e-34
 Identities = 69/119 (57%), Positives = 91/119 (76%)
 Frame = -3

Query: 772 EHYSCMFDLLGRAGFLKNAFRLIETMPFEPGPTVWGALLGACVIHRDIEVGDIIAKRFAA 593
           EHY CM DLL RA  L  A +LI+TMPF+PG  + GALL AC++H+D+EVG+ + K  ++
Sbjct: 382 EHYGCMVDLLSRARHLDCALQLIKTMPFKPGEAILGALLSACIVHQDLEVGERVVKLVSS 441

Query: 592 RIECLSDGEYVMLANLYASCGRWDEANRWRAMMHDLDINKTSGNSMIEVNGTMYKFLAG 416
           R   LSDGE +M +NLYASCG+W+EAN+WR MM+D  I KT+G S++EVNG  +KFLAG
Sbjct: 442 RGNYLSDGELMMFSNLYASCGQWEEANKWREMMNDTGIVKTAGFSVVEVNGKFHKFLAG 500


>ref|XP_002515415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545359|gb|EEF46864.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  146 bits (368), Expect = 6e-33
 Identities = 67/121 (55%), Positives = 90/121 (74%)
 Frame = -3

Query: 772 EHYSCMFDLLGRAGFLKNAFRLIETMPFEPGPTVWGALLGACVIHRDIEVGDIIAKRFAA 593
           EHY CM +LLGR+G L  A ++IETMPFEPG ++ GALL AC+I++D+E G+ + +   +
Sbjct: 382 EHYGCMVNLLGRSGHLALALQVIETMPFEPGESILGALLSACIIYQDLETGERVIELVCS 441

Query: 592 RIECLSDGEYVMLANLYASCGRWDEANRWRAMMHDLDINKTSGNSMIEVNGTMYKFLAGH 413
           +   LSDGE +M +NLYASCG W+EANRWR MM+   I KT+G S+IEV+G   KFLAG 
Sbjct: 442 KAHYLSDGELMMFSNLYASCGNWEEANRWREMMNSTGIVKTAGYSVIEVSGRFQKFLAGE 501

Query: 412 L 410
           +
Sbjct: 502 V 502


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  126 bits (316), Expect = 6e-27
 Identities = 61/133 (45%), Positives = 88/133 (66%)
 Frame = -3

Query: 772 EHYSCMFDLLGRAGFLKNAFRLIETMPFEPGPTVWGALLGACVIHRDIEVGDIIAKRFAA 593
           EHY+CM DLLGRAG L  A+  IE MP EPG +VWGA LG+C IH +IE+G+ +A+    
Sbjct: 78  EHYACMVDLLGRAGHLNEAWDFIEKMPIEPGASVWGAFLGSCRIHCNIELGERVAE-LLL 136

Query: 592 RIECLSDGEYVMLANLYASCGRWDEANRWRAMMHDLDINKTSGNSMIEVNGTMYKFLAGH 413
            ++  + G YV+L+N+YA+ GRWD+  + R MM + D+ K+ G S+IEVN  ++ F+ G 
Sbjct: 137 NLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEKDVKKSPGCSLIEVNNKLHSFVVGD 196

Query: 412 LK*AS*TSFYARL 374
           +      + YA L
Sbjct: 197 ISHPQTEAIYAML 209