BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033985
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    71   1e-10
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    71   1e-10
gb|ABA98327.2| transposon protein, putative, CACTA, En/Spm sub-c...    67   1e-09
gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japo...    66   3e-09
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...    66   3e-09

>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/118 (34%), Positives = 63/118 (53%)
 Frame = +1

Query: 10  ETSMKRQKARVSDDFEGERNSAYFHAVTKFRLKKSQIFEVTKLDGTVLRQQQEIKNYLVE 189
           E  M RQ++RV    EG+RN+A+FHA    R + ++I E+ + DG+    Q+ IK     
Sbjct: 348 EEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQEGIKRMAEV 407

Query: 190 TYEQK*LMQPVQMSKHLLELIPKAVTEADNDILGAFLSVEEVKVVVFSMDANSSPGPD 363
            YE     +P    + +L+ IP  V +  N  LG   + EE+K  +F M +  +PGPD
Sbjct: 408 FYENLFSSEPCDSMEEVLDAIPNKVGDFINGELGKQYTNEEIKTALFQMGSTKAPGPD 465


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
           protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/118 (34%), Positives = 63/118 (53%)
 Frame = +1

Query: 10  ETSMKRQKARVSDDFEGERNSAYFHAVTKFRLKKSQIFEVTKLDGTVLRQQQEIKNYLVE 189
           E  M RQ++RV    EG+RN+A+FHA    R + ++I E+ + DG+    Q+ IK     
Sbjct: 305 EEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCISQEGIKRMAEV 364

Query: 190 TYEQK*LMQPVQMSKHLLELIPKAVTEADNDILGAFLSVEEVKVVVFSMDANSSPGPD 363
            YE     +P    + +L+ IP  V +  N  LG   + EE+K  +F M +  +PGPD
Sbjct: 365 FYENLFSSEPCDSMEEVLDAIPNKVGDFINGELGKQYTNEEIKTALFQMGSTKAPGPD 422


>gb|ABA98327.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 2042

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
 Frame = +1

Query: 28   QKARVSDDFEGERNSAYFHAVTKFRLKKSQIFEVTKLDGTVLRQQQEIKNYLVETYEQK* 207
            Q+A+  D   G+ N+ Y+H +   + +K +IF + + +G +    + IKNY+ E Y++  
Sbjct: 1510 QRAKTDDVRLGDNNTKYYHLIANGKHRKKRIFSLDQEEGKI-EWNEAIKNYITEFYKK-- 1566

Query: 208  LMQPVQMSK-----HLLELIPKAVTEADNDILGAFLSVEEVKVVVFSMDANSSPGPD 363
            L  P   S      + ++ IP+ VTEA+ND L A  S EEV+  +F M+ N +PGPD
Sbjct: 1567 LFGPPDASTLSFDANRIDDIPQ-VTEAENDHLIAPFSEEEVREAIFDMETNKAPGPD 1622


>gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japonica Group]
          Length = 915

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/113 (31%), Positives = 65/113 (57%)
 Frame = +1

Query: 25  RQKARVSDDFEGERNSAYFHAVTKFRLKKSQIFEVTKLDGTVLRQQQEIKNYLVETYEQK 204
           RQ+A V+   +G+RN+++FHA    R + ++I  + K DG+ +  ++E K+++++ ++  
Sbjct: 549 RQRAHVAWLQKGDRNTSFFHATCSERKRSNRIGRLKKEDGSWVESEEEKKSFIMQYFKNM 608

Query: 205 *LMQPVQMSKHLLELIPKAVTEADNDILGAFLSVEEVKVVVFSMDANSSPGPD 363
                 Q  + LL  + K VTE  N+ L A   VEE+K  + S+    +PGPD
Sbjct: 609 FQSNGCQHPERLLSKVKKKVTEEMNECLMAEFIVEEIKTSIDSIGDLKAPGPD 661


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
           gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
           Japonica Group]
          Length = 1453

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/113 (31%), Positives = 65/113 (57%)
 Frame = +1

Query: 25  RQKARVSDDFEGERNSAYFHAVTKFRLKKSQIFEVTKLDGTVLRQQQEIKNYLVETYEQK 204
           RQ+A V+   +G+RN+++FHA    R + ++I  + K DG+ +  ++E K+++++ ++  
Sbjct: 586 RQRAHVAWLQKGDRNTSFFHATCSERKRSNRIGRLKKEDGSWVESEEEKKSFIMQYFKNM 645

Query: 205 *LMQPVQMSKHLLELIPKAVTEADNDILGAFLSVEEVKVVVFSMDANSSPGPD 363
                 Q  + LL  + K VTE  N+ L A   VEE+K  + S+    +PGPD
Sbjct: 646 FQSNGCQHPERLLSKVKKKVTEEMNECLMAEFIVEEIKTSIDSIGDLKAPGPD 698