BLASTX nr result

ID: Coptis25_contig00033974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033974
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513395.1| LOB domain-containing protein, putative [Ric...   240   4e-61
ref|XP_002297935.1| predicted protein [Populus trichocarpa] gi|2...   239   9e-61
ref|XP_002304584.1| predicted protein [Populus trichocarpa] gi|2...   239   9e-61
ref|XP_002310683.1| predicted protein [Populus trichocarpa] gi|2...   238   1e-60
ref|NP_001236751.1| uncharacterized protein LOC100306560 [Glycin...   238   2e-60

>ref|XP_002513395.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223547303|gb|EEF48798.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 147

 Score =  240 bits (612), Expect = 4e-61
 Identities = 124/169 (73%), Positives = 133/169 (78%)
 Frame = -2

Query: 716 IKENGRKLGATSPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHKVFGASNVNKMLQE 537
           +KE+GRK GA SPCAACKLLRRRCAQDCVF+PYFPADEPQKFA+VHKVFGASNVNKMLQE
Sbjct: 1   MKESGRKQGALSPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQE 60

Query: 536 LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHLRMRQ 357
           LPEHQR DAVSSMVYEANARVRDPVYGCVGAISSLQQQID LQTQLAIAQAEVVH+RMRQ
Sbjct: 61  LPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDSLQTQLAIAQAEVVHMRMRQ 120

Query: 356 TTXXXXXXXXXXXXXXXXXXXXXXXXXXSMFSMELVVDQTNMGESLWSC 210
                                       +  +M++VVDQ N GESLWSC
Sbjct: 121 ----------------------FGTSSSNPSAMDMVVDQANAGESLWSC 147


>ref|XP_002297935.1| predicted protein [Populus trichocarpa] gi|222845193|gb|EEE82740.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  239 bits (609), Expect = 9e-61
 Identities = 123/171 (71%), Positives = 133/171 (77%), Gaps = 2/171 (1%)
 Frame = -2

Query: 716 IKENGRKLGATSPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHKVFGASNVNKMLQE 537
           +KE GRK GA +PCAACKLLRRRCAQDCVF+PYFPADEPQKFANVHKVFGASNVNKMLQE
Sbjct: 1   MKEGGRKQGAPAPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQE 60

Query: 536 LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHLRMRQ 357
           LP HQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQID LQTQLA+AQAEVVHLR+RQ
Sbjct: 61  LPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQ 120

Query: 356 TTXXXXXXXXXXXXXXXXXXXXXXXXXXS--MFSMELVVDQTNMGESLWSC 210
           T                              MF M++V D T++GES+WSC
Sbjct: 121 TATLSNHGLSPASPSNSGSPSSRLMGSQMKPMFDMDMV-DHTSLGESMWSC 170


>ref|XP_002304584.1| predicted protein [Populus trichocarpa] gi|222842016|gb|EEE79563.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  239 bits (609), Expect = 9e-61
 Identities = 124/171 (72%), Positives = 133/171 (77%), Gaps = 2/171 (1%)
 Frame = -2

Query: 716 IKENGRKLGATSPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHKVFGASNVNKMLQE 537
           +KE  RK GA SPCAACKLLRRRCAQDCVF+PYFPADEPQKFANVHKVFGASNVNKMLQE
Sbjct: 1   MKEGSRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQE 60

Query: 536 LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHLRMRQ 357
           LP HQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLA+AQAEVVHLR+RQ
Sbjct: 61  LPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVVHLRVRQ 120

Query: 356 TTXXXXXXXXXXXXXXXXXXXXXXXXXXS--MFSMELVVDQTNMGESLWSC 210
           T                              +F ME+V D T++GES+WSC
Sbjct: 121 TATLSNHGPPPASPGNSGSPSSRLMGSQMKPIFDMEMV-DHTSLGESMWSC 170


>ref|XP_002310683.1| predicted protein [Populus trichocarpa] gi|222853586|gb|EEE91133.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  238 bits (608), Expect = 1e-60
 Identities = 122/169 (72%), Positives = 132/169 (78%)
 Frame = -2

Query: 716 IKENGRKLGATSPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHKVFGASNVNKMLQE 537
           +KE+GRKLGA SPCAACKLLRRRCAQDC+F+PYFPADEPQKFA+VHKVFGASNVNKMLQE
Sbjct: 1   MKESGRKLGALSPCAACKLLRRRCAQDCMFAPYFPADEPQKFASVHKVFGASNVNKMLQE 60

Query: 536 LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHLRMRQ 357
           LPEHQR DAVSSMVYEANARVRDPVYGCVGAISSLQ+QID LQTQLAIAQAEVVH+R+RQ
Sbjct: 61  LPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQKQIDSLQTQLAIAQAEVVHMRVRQ 120

Query: 356 TTXXXXXXXXXXXXXXXXXXXXXXXXXXSMFSMELVVDQTNMGESLWSC 210
            T                              M++ VDQ  MGESLWSC
Sbjct: 121 FTSSSNPGV-----------------------MDMAVDQATMGESLWSC 146


>ref|NP_001236751.1| uncharacterized protein LOC100306560 [Glycine max]
           gi|255628883|gb|ACU14786.1| unknown [Glycine max]
          Length = 159

 Score =  238 bits (606), Expect = 2e-60
 Identities = 120/167 (71%), Positives = 131/167 (78%)
 Frame = -2

Query: 716 IKENGRKLGATSPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHKVFGASNVNKMLQE 537
           +K+ GRK GA SPCAACKLLRRRCAQDCVF+PYFPADEPQKFANVHKVFGASNVNKMLQ+
Sbjct: 1   MKDGGRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQD 60

Query: 536 LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHLRMRQ 357
           LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLA+AQAE VHLR+RQ
Sbjct: 61  LPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQ 120

Query: 356 TTXXXXXXXXXXXXXXXXXXXXXXXXXXSMFSMELVVDQTNMGESLW 216
                                        +F M++VVDQT  G+S+W
Sbjct: 121 AA--------SLYSPTSPTNSGSPSQAKPIFDMDMVVDQTPYGDSIW 159


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