BLASTX nr result
ID: Coptis25_contig00033971
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00033971 (549 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat... 244 7e-63 emb|CBI21281.3| unnamed protein product [Vitis vinifera] 244 7e-63 ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ... 236 2e-60 ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat... 236 2e-60 ref|NP_186850.1| pentatricopeptide repeat-containing protein [Ar... 231 6e-59 >ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein At2g01510-like, partial [Vitis vinifera] Length = 825 Score = 244 bits (623), Expect = 7e-63 Identities = 114/176 (64%), Positives = 143/176 (81%) Frame = -1 Query: 528 VSMDQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDAI 349 V DQATFA +LR++ +ASL GKQLH+FII+ GF+SNVF+GSALLD YA CGSIKDA+ Sbjct: 448 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 507 Query: 348 QTFNEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACSHCG 169 QTF EMPDRN+VSWNAMI A+A+NG+ AT++SF EMV S QPDSV+FL +LSACSH G Sbjct: 508 QTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSG 567 Query: 168 LVKEGLQYFKAMTHTYKVDPRREHYSCMIDLLGRGGWFDELENFMVQMPFEPDEVM 1 LV+EGL +F +MT YK+DPRREHY+ ++D+L R G F+E E M +MP +PDE+M Sbjct: 568 LVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIM 623 Score = 79.7 bits (195), Expect = 3e-13 Identities = 51/163 (31%), Positives = 86/163 (52%) Frame = -1 Query: 531 GVSMDQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDA 352 G+ + TFA VL + + + G+Q+H+F+I+ F+ NVF +ALLDFY+ S+ DA Sbjct: 245 GLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDA 304 Query: 351 IQTFNEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACSHC 172 + F+EMP+++ VS+N +I +A +G F E+ + F F ++LS S+ Sbjct: 305 RKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNT 364 Query: 171 GLVKEGLQYFKAMTHTYKVDPRREHYSCMIDLLGRGGWFDELE 43 + G Q A T D + ++D+ + G F+E E Sbjct: 365 LDWEMGRQ-IHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAE 406 Score = 68.9 bits (167), Expect = 5e-10 Identities = 39/123 (31%), Positives = 60/123 (48%) Frame = -1 Query: 516 QATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDAIQTFN 337 Q FA +L A G+Q+HA I S + G++L+D YA CG ++A F Sbjct: 351 QFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFT 410 Query: 336 EMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACSHCGLVKE 157 + R+ V W AMI A+ + G ++ F++M Q+ D TF S+L A + + Sbjct: 411 NLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSL 470 Query: 156 GLQ 148 G Q Sbjct: 471 GKQ 473 Score = 64.7 bits (156), Expect = 9e-09 Identities = 40/124 (32%), Positives = 61/124 (49%) Frame = -1 Query: 537 RDGVSMDQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIK 358 R G D TF +L Q+ II+LG+ S + G+ L+D Y + Sbjct: 142 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 201 Query: 357 DAIQTFNEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACS 178 A Q F EMP+ + VS+NAMI ++++G + F EM S +P TF ++L C+ Sbjct: 202 LACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CA 259 Query: 177 HCGL 166 + GL Sbjct: 260 NIGL 263 >emb|CBI21281.3| unnamed protein product [Vitis vinifera] Length = 785 Score = 244 bits (623), Expect = 7e-63 Identities = 114/176 (64%), Positives = 143/176 (81%) Frame = -1 Query: 528 VSMDQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDAI 349 V DQATFA +LR++ +ASL GKQLH+FII+ GF+SNVF+GSALLD YA CGSIKDA+ Sbjct: 408 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 467 Query: 348 QTFNEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACSHCG 169 QTF EMPDRN+VSWNAMI A+A+NG+ AT++SF EMV S QPDSV+FL +LSACSH G Sbjct: 468 QTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSG 527 Query: 168 LVKEGLQYFKAMTHTYKVDPRREHYSCMIDLLGRGGWFDELENFMVQMPFEPDEVM 1 LV+EGL +F +MT YK+DPRREHY+ ++D+L R G F+E E M +MP +PDE+M Sbjct: 528 LVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIM 583 Score = 80.1 bits (196), Expect = 2e-13 Identities = 51/160 (31%), Positives = 85/160 (53%) Frame = -1 Query: 522 MDQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDAIQT 343 +D TFA VL + + + G+Q+H+F+I+ F+ NVF +ALLDFY+ S+ DA + Sbjct: 208 IDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKL 267 Query: 342 FNEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACSHCGLV 163 F+EMP+++ VS+N +I +A +G F E+ + F F ++LS S+ Sbjct: 268 FDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDW 327 Query: 162 KEGLQYFKAMTHTYKVDPRREHYSCMIDLLGRGGWFDELE 43 + G Q A T D + ++D+ + G F+E E Sbjct: 328 EMGRQ-IHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAE 366 Score = 68.9 bits (167), Expect = 5e-10 Identities = 39/123 (31%), Positives = 60/123 (48%) Frame = -1 Query: 516 QATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDAIQTFN 337 Q FA +L A G+Q+HA I S + G++L+D YA CG ++A F Sbjct: 311 QFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFT 370 Query: 336 EMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACSHCGLVKE 157 + R+ V W AMI A+ + G ++ F++M Q+ D TF S+L A + + Sbjct: 371 NLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSL 430 Query: 156 GLQ 148 G Q Sbjct: 431 GKQ 433 >ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 1125 Score = 236 bits (602), Expect = 2e-60 Identities = 113/179 (63%), Positives = 139/179 (77%) Frame = -1 Query: 537 RDGVSMDQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIK 358 R + D AT+A ++R+ +ASL GKQLH+ II G+ISNVF+GSAL+D YA CGSIK Sbjct: 494 RAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIK 553 Query: 357 DAIQTFNEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACS 178 DA+Q F EMP RN VSWNA+I A+A+NGDG+ T+R F EMV+S QPDSV+ LSIL ACS Sbjct: 554 DALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACS 613 Query: 177 HCGLVKEGLQYFKAMTHTYKVDPRREHYSCMIDLLGRGGWFDELENFMVQMPFEPDEVM 1 HCGLV+EGLQYF +MT YK+ P++EHY+ ID+L RGG FDE E M QMPFEPDE+M Sbjct: 614 HCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIM 672 Score = 74.3 bits (181), Expect = 1e-11 Identities = 36/115 (31%), Positives = 66/115 (57%) Frame = -1 Query: 531 GVSMDQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDA 352 G + TFA +L + + + FG+Q+H F+++ F+ NVF +ALLDFY+ + +A Sbjct: 294 GYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEA 353 Query: 351 IQTFNEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILS 187 + F EMP+ + +S+N ++ +A NG ++ F E+ + F + F ++LS Sbjct: 354 SKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLS 408 Score = 73.2 bits (178), Expect = 3e-11 Identities = 38/120 (31%), Positives = 66/120 (55%) Frame = -1 Query: 507 FACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDAIQTFNEMP 328 FA +L A I +L G+Q+H+ I IS + G++L+D YA CG +A + F+++ Sbjct: 403 FATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLA 462 Query: 327 DRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACSHCGLVKEGLQ 148 ++ V W AMI ++ + G ++ F EM ++ D+ T+ SI+ AC+ + G Q Sbjct: 463 IQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQ 522 Score = 70.5 bits (171), Expect = 2e-10 Identities = 35/118 (29%), Positives = 67/118 (56%) Frame = -1 Query: 537 RDGVSMDQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIK 358 R G+ D + A +L S+ +Q+H+ +I+LG+ S + ++LLD Y S+ Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLG 250 Query: 357 DAIQTFNEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSA 184 A Q FN++P+R+ V++NA++ +++ G + F +M + ++P TF +IL+A Sbjct: 251 LAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308 >ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein At2g01510-like [Glycine max] Length = 815 Score = 236 bits (601), Expect = 2e-60 Identities = 111/179 (62%), Positives = 139/179 (77%) Frame = -1 Query: 537 RDGVSMDQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIK 358 R + D AT+A +LR+ +ASL GKQLH+ IIR G +SNVF+GSAL+D YA CGSIK Sbjct: 435 RAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIK 494 Query: 357 DAIQTFNEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACS 178 +A+Q F EMP RN VSWNA+I A+A+NGDG +RSF +M+ S QP+SV+FLSIL ACS Sbjct: 495 EALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACS 554 Query: 177 HCGLVKEGLQYFKAMTHTYKVDPRREHYSCMIDLLGRGGWFDELENFMVQMPFEPDEVM 1 HCGLV+EGLQYF +MT YK++PRREHY+ M+D+L R G FDE E M +MPFEPDE+M Sbjct: 555 HCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIM 613 Score = 73.6 bits (179), Expect = 2e-11 Identities = 41/128 (32%), Positives = 71/128 (55%) Frame = -1 Query: 531 GVSMDQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDA 352 G + TFA VL + + + FG+Q+H+F+++ F+ NVF +ALLDFY+ I +A Sbjct: 235 GFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEA 294 Query: 351 IQTFNEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACSHC 172 + F EMP+ + +S+N +I A NG ++ F E+ + F F ++LS ++ Sbjct: 295 RKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANS 354 Query: 171 GLVKEGLQ 148 ++ G Q Sbjct: 355 LNLEMGRQ 362 Score = 69.7 bits (169), Expect = 3e-10 Identities = 45/165 (27%), Positives = 78/165 (47%) Frame = -1 Query: 516 QATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDAIQTFN 337 Q FA +L A +L G+Q+H+ I IS V G++L+D YA C +A + F Sbjct: 341 QFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFA 400 Query: 336 EMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACSHCGLVKE 157 ++ ++ V W A+I + + G ++ F EM ++ DS T+ SIL AC++ + Sbjct: 401 DLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTL 460 Query: 156 GLQYFKAMTHTYKVDPRREHYSCMIDLLGRGGWFDELENFMVQMP 22 G Q + + + S ++D+ + G E +MP Sbjct: 461 GKQLHSRIIRSGCLS-NVFSGSALVDMYAKCGSIKEALQMFQEMP 504 Score = 58.5 bits (140), Expect = 7e-07 Identities = 31/118 (26%), Positives = 61/118 (51%) Frame = -1 Query: 537 RDGVSMDQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIK 358 R G+ D T A +L S+ Q+H ++++G+ S + ++LLD Y S+ Sbjct: 132 RHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLG 191 Query: 357 DAIQTFNEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSA 184 A F M +++ V++NA++ +++ G + + F +M F+P TF ++L+A Sbjct: 192 LACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249 >ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At2g01510 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana] gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana] gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 825 Score = 231 bits (589), Expect = 6e-59 Identities = 105/173 (60%), Positives = 136/173 (78%) Frame = -1 Query: 519 DQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDAIQTF 340 DQ+TFA VL+++ ASL GKQLHAFIIR G + NVF+GS L+D YA CGSIKDA+Q F Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVF 510 Query: 339 NEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACSHCGLVK 160 EMPDRN VSWNA+I AHA NGDG A + +F++M++S QPDSV+ L +L+ACSHCG V+ Sbjct: 511 EEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVE 570 Query: 159 EGLQYFKAMTHTYKVDPRREHYSCMIDLLGRGGWFDELENFMVQMPFEPDEVM 1 +G +YF+AM+ Y + P+++HY+CM+DLLGR G F E E M +MPFEPDE+M Sbjct: 571 QGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIM 623 Score = 68.6 bits (166), Expect = 6e-10 Identities = 36/108 (33%), Positives = 59/108 (54%) Frame = -1 Query: 507 FACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDAIQTFNEMP 328 FA +L A ++SL G+QLH + S + G++L+D YA C ++A F +P Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413 Query: 327 DRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSA 184 R VSW A+I + + G A ++ F++M S+ + D TF ++L A Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461 Score = 66.2 bits (160), Expect = 3e-09 Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 1/164 (0%) Frame = -1 Query: 510 TFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVFAGSALLDFYANCGSIKDAIQTFNEM 331 TF+ VL++ + G+QLHA + GF + G+ +LDFY+ + + F+EM Sbjct: 252 TFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM 311 Query: 330 PDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSACSHCGLVKEGL 151 P+ + VS+N +I ++++ A++ F EM F + F ++LS ++ ++ G Sbjct: 312 PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371 Query: 150 Q-YFKAMTHTYKVDPRREHYSCMIDLLGRGGWFDELENFMVQMP 22 Q + +A+ T D + ++D+ + F+E E +P Sbjct: 372 QLHCQALLAT--ADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413 Score = 57.0 bits (136), Expect = 2e-06 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 2/114 (1%) Frame = -1 Query: 519 DQATFACVLRSAGIVASLGFGKQLHAFIIRLGFISNVF--AGSALLDFYANCGSIKDAIQ 346 D TF +L Q+HAF ++LGF +N F + LL Y + A Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205 Query: 345 TFNEMPDRNVVSWNAMIGAHARNGDGNATMRSFSEMVQSDFQPDSVTFLSILSA 184 F E+P+++ V++N +I + ++G ++ F +M QS QP TF +L A Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259