BLASTX nr result

ID: Coptis25_contig00033970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033970
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ14989.1| OSJNBb0018A10.18 [Oryza sativa Japonica Group]         63   2e-08
emb|CAH66080.1| H0215E01.8 [Oryza sativa Indica Group]                 63   2e-08
emb|CAH66091.1| H0209A05.8 [Oryza sativa Indica Group]                 63   2e-08
gb|ABA96752.1| transposon protein, putative, CACTA, En/Spm sub-c...    63   3e-08
gb|ABA98217.1| transposon protein, putative, CACTA, En/Spm sub-c...    63   3e-08

>emb|CAJ14989.1| OSJNBb0018A10.18 [Oryza sativa Japonica Group]
          Length = 624

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/108 (32%), Positives = 55/108 (50%)
 Frame = +2

Query: 62  KHFNGEQEHNLPPTRLKGTDIDKMLTCVKYVPGKIQKGSKRSRADGSVNVAXXXXXXXXX 241
           K+FNG ++   PPT L GT++  ++  +    GK +K  KR     S             
Sbjct: 18  KNFNGHRDTAGPPTELTGTEVHNLVVGITNEFGKKRKVGKRKEKSTSKEKTEEHVEKQKT 77

Query: 242 XAGIEVTGAFYRRSIFFELGYWPSHEVRYCLDVMHDEKNVSEHILNLI 385
               +    + ++SIF+ L YW   EVR+C+D+MH EKNV E ++ L+
Sbjct: 78  ----KERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNVCESLMGLL 121


>emb|CAH66080.1| H0215E01.8 [Oryza sativa Indica Group]
          Length = 585

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/108 (32%), Positives = 55/108 (50%)
 Frame = +2

Query: 62  KHFNGEQEHNLPPTRLKGTDIDKMLTCVKYVPGKIQKGSKRSRADGSVNVAXXXXXXXXX 241
           K+FNG ++   PPT L GT++  ++  +    GK +K  KR     S             
Sbjct: 18  KNFNGHRDTAGPPTELTGTEVHNLVVGITNEFGKKRKVGKRKEKSTSKEKTEEHVEKQKT 77

Query: 242 XAGIEVTGAFYRRSIFFELGYWPSHEVRYCLDVMHDEKNVSEHILNLI 385
               +    + ++SIF+ L YW   EVR+C+D+MH EKNV E ++ L+
Sbjct: 78  ----KERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNVCESLMGLL 121


>emb|CAH66091.1| H0209A05.8 [Oryza sativa Indica Group]
          Length = 1025

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/108 (32%), Positives = 56/108 (51%)
 Frame = +2

Query: 62  KHFNGEQEHNLPPTRLKGTDIDKMLTCVKYVPGKIQKGSKRSRADGSVNVAXXXXXXXXX 241
           K+FNG ++   PPT L GT++  ++  +    GK +K  KR       + A         
Sbjct: 489 KNFNGHRDTAGPPTELTGTEVHNLVMGITNEFGKKRKVGKRKEK----STAKEKTEEHVE 544

Query: 242 XAGIEVTGAFYRRSIFFELGYWPSHEVRYCLDVMHDEKNVSEHILNLI 385
               +    + ++SIF+ L YW   EVR+C+D+MH EKNV E ++ L+
Sbjct: 545 KQKTKERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNVYESLMGLL 592


>gb|ABA96752.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 1095

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/108 (32%), Positives = 55/108 (50%)
 Frame = +2

Query: 62  KHFNGEQEHNLPPTRLKGTDIDKMLTCVKYVPGKIQKGSKRSRADGSVNVAXXXXXXXXX 241
           K+FNG ++   PPT L GT++  ++  +    GK +K  KR     S             
Sbjct: 489 KNFNGHRDTAGPPTELTGTEVHNLVMGITNEFGKKRKVGKRKEKSTSKEKTEEHVEKQKT 548

Query: 242 XAGIEVTGAFYRRSIFFELGYWPSHEVRYCLDVMHDEKNVSEHILNLI 385
               +    + ++SIF+ L YW   EVR+C+D+MH EKNV E ++ L+
Sbjct: 549 ----KERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNVCESLMGLL 592


>gb|ABA98217.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 1162

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/108 (32%), Positives = 55/108 (50%)
 Frame = +2

Query: 62  KHFNGEQEHNLPPTRLKGTDIDKMLTCVKYVPGKIQKGSKRSRADGSVNVAXXXXXXXXX 241
           K+FNG ++   PPT L GT++  ++  +    GK +K  KR     S             
Sbjct: 556 KNFNGHRDTAGPPTELTGTEVHNLVMGITNEFGKKRKVGKRKEKSTSKEKTEEHVEKQKT 615

Query: 242 XAGIEVTGAFYRRSIFFELGYWPSHEVRYCLDVMHDEKNVSEHILNLI 385
               +    + ++SIF+ L YW   EVR+C+D+MH EKNV E ++ L+
Sbjct: 616 ----KERSMWKKKSIFWRLPYWKDLEVRHCIDLMHVEKNVCESLMGLL 659


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