BLASTX nr result

ID: Coptis25_contig00033958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033958
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280715.1| PREDICTED: beta-galactosidase 3 [Vitis vinif...   170   1e-40
emb|CAN78072.1| hypothetical protein VITISV_013292 [Vitis vinifera]   170   1e-40
gb|AAK81874.1| putative beta-galactosidase BG1 [Vitis vinifera]       170   1e-40
ref|XP_002510455.1| beta-galactosidase, putative [Ricinus commun...   169   2e-40
ref|XP_002274449.2| PREDICTED: beta-galactosidase 3 [Vitis vinif...   169   2e-40

>ref|XP_002280715.1| PREDICTED: beta-galactosidase 3 [Vitis vinifera]
           gi|302142564|emb|CBI19767.3| unnamed protein product
           [Vitis vinifera]
          Length = 854

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/90 (86%), Positives = 84/90 (93%)
 Frame = -1

Query: 272 IQCSVTYDRKAILINGQRRILISGSIHYPRSTPQMWEDLIVKAKEGGLDVVQTYVFWDGH 93
           IQCSVTYD+KAI+INGQRRILISGSIHYPRSTP MWEDLI KAK+GGLDV+ TY+FW+ H
Sbjct: 25  IQCSVTYDKKAIVINGQRRILISGSIHYPRSTPDMWEDLIRKAKDGGLDVIDTYIFWNVH 84

Query: 92  EPSPGNYYFEGRYDLVRFIKTVQKAGLYVH 3
           EPSPGNY FEGRYDLVRFIKTVQK GLYVH
Sbjct: 85  EPSPGNYNFEGRYDLVRFIKTVQKVGLYVH 114


>emb|CAN78072.1| hypothetical protein VITISV_013292 [Vitis vinifera]
          Length = 854

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/90 (86%), Positives = 84/90 (93%)
 Frame = -1

Query: 272 IQCSVTYDRKAILINGQRRILISGSIHYPRSTPQMWEDLIVKAKEGGLDVVQTYVFWDGH 93
           IQCSVTYD+KAI+INGQRRILISGSIHYPRSTP MWEDLI KAK+GGLDV+ TY+FW+ H
Sbjct: 25  IQCSVTYDKKAIVINGQRRILISGSIHYPRSTPDMWEDLIRKAKDGGLDVIDTYIFWNVH 84

Query: 92  EPSPGNYYFEGRYDLVRFIKTVQKAGLYVH 3
           EPSPGNY FEGRYDLVRFIKTVQK GLYVH
Sbjct: 85  EPSPGNYNFEGRYDLVRFIKTVQKVGLYVH 114


>gb|AAK81874.1| putative beta-galactosidase BG1 [Vitis vinifera]
          Length = 854

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/90 (86%), Positives = 84/90 (93%)
 Frame = -1

Query: 272 IQCSVTYDRKAILINGQRRILISGSIHYPRSTPQMWEDLIVKAKEGGLDVVQTYVFWDGH 93
           IQCSVTYD+KAI+INGQRRILISGSIHYPRSTP MWEDLI KAK+GGLDV+ TY+FW+ H
Sbjct: 25  IQCSVTYDKKAIVINGQRRILISGSIHYPRSTPDMWEDLIRKAKDGGLDVIDTYIFWNVH 84

Query: 92  EPSPGNYYFEGRYDLVRFIKTVQKAGLYVH 3
           EPSPGNY FEGRYDLVRFIKTVQK GLYVH
Sbjct: 85  EPSPGNYNFEGRYDLVRFIKTVQKVGLYVH 114


>ref|XP_002510455.1| beta-galactosidase, putative [Ricinus communis]
           gi|223551156|gb|EEF52642.1| beta-galactosidase, putative
           [Ricinus communis]
          Length = 846

 Score =  169 bits (429), Expect = 2e-40
 Identities = 83/111 (74%), Positives = 91/111 (81%), Gaps = 2/111 (1%)
 Frame = -1

Query: 329 TNSVSK--TXXXXXXXXXXXLIQCSVTYDRKAILINGQRRILISGSIHYPRSTPQMWEDL 156
           TNSVSK  T           L+QC+VTYD+KAI+INGQRRILISGSIHYPRSTP+MWEDL
Sbjct: 3   TNSVSKLLTFFLMVLLMGSKLVQCTVTYDKKAIIINGQRRILISGSIHYPRSTPEMWEDL 62

Query: 155 IVKAKEGGLDVVQTYVFWDGHEPSPGNYYFEGRYDLVRFIKTVQKAGLYVH 3
           I KAK+GGLDV+ TYVFWD HE SPGNY F+GRYDLVRFIKTVQK GLY H
Sbjct: 63  IQKAKDGGLDVIDTYVFWDVHETSPGNYNFDGRYDLVRFIKTVQKVGLYAH 113


>ref|XP_002274449.2| PREDICTED: beta-galactosidase 3 [Vitis vinifera]
          Length = 898

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/90 (86%), Positives = 85/90 (94%)
 Frame = -1

Query: 272 IQCSVTYDRKAILINGQRRILISGSIHYPRSTPQMWEDLIVKAKEGGLDVVQTYVFWDGH 93
           IQCSVTYDRKAI+INGQRRILISGSIHYPRSTP MWED+I KAK+GGLDVV+TYVFW+ H
Sbjct: 77  IQCSVTYDRKAIVINGQRRILISGSIHYPRSTPDMWEDIIQKAKDGGLDVVETYVFWNVH 136

Query: 92  EPSPGNYYFEGRYDLVRFIKTVQKAGLYVH 3
           EPSPG+Y FEGRYDLVRFI+TVQKAGLY H
Sbjct: 137 EPSPGSYNFEGRYDLVRFIRTVQKAGLYAH 166


Top