BLASTX nr result

ID: Coptis25_contig00033940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033940
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242...   162   2e-38
ref|XP_002523580.1| conserved hypothetical protein [Ricinus comm...   162   2e-38
ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|2...   157   7e-37
ref|XP_002880101.1| hypothetical protein ARALYDRAFT_483550 [Arab...   151   6e-35
ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34

>ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera]
          Length = 559

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/115 (66%), Positives = 98/115 (85%)
 Frame = -1

Query: 346 GNKVVTYSSLHGHASYSKPGMVLQGNTKLGIGIRNDTAKSKNVLDTGVRYEVVSADYLGS 167
           GNKVV+Y+SLHGHA Y KPG+VLQG+  +GI  RNDTAKSK V+DTG RY VV+A+YLGS
Sbjct: 430 GNKVVSYASLHGHAFYPKPGLVLQGSGAMGI--RNDTAKSKMVMDTGTRYIVVAAEYLGS 487

Query: 166 GVITEPPWLNFAREWGPKIDYDLDTELRKIEKFLPGKLKKAFKQIVQSLPSEVLG 2
            V+ EPPWLN+ R+WGPKI YDL  E++++EK LPGKLK AF+++V+SLP+E+LG
Sbjct: 488 AVV-EPPWLNYYRKWGPKISYDLAAEIKEVEKLLPGKLKSAFEKLVKSLPNEILG 541


>ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis]
           gi|223537142|gb|EEF38775.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 551

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/115 (67%), Positives = 94/115 (81%)
 Frame = -1

Query: 346 GNKVVTYSSLHGHASYSKPGMVLQGNTKLGIGIRNDTAKSKNVLDTGVRYEVVSADYLGS 167
           GNK V YSSLHGHA YSKPG+VLQGN   GIGIRNDTAKS  +LDTG ++ VV+A+YLG 
Sbjct: 422 GNKFVGYSSLHGHAMYSKPGLVLQGNN--GIGIRNDTAKSGKILDTGAKFSVVAAEYLGM 479

Query: 166 GVITEPPWLNFAREWGPKIDYDLDTELRKIEKFLPGKLKKAFKQIVQSLPSEVLG 2
            +I EPPW+NF R+WGPKI Y++  E++KIEK LPGKLK AF+++V  LPSEVLG
Sbjct: 480 TII-EPPWINFFRKWGPKISYNIADEIKKIEKILPGKLKSAFEKVVNGLPSEVLG 533


>ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|222872727|gb|EEF09858.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  157 bits (398), Expect = 7e-37
 Identities = 77/115 (66%), Positives = 92/115 (80%)
 Frame = -1

Query: 346 GNKVVTYSSLHGHASYSKPGMVLQGNTKLGIGIRNDTAKSKNVLDTGVRYEVVSADYLGS 167
           GNK VTYSSLHGHA Y+KPG+VLQG+    IGIRNDTAKSK  +DTG    VV+A+YLG 
Sbjct: 458 GNKAVTYSSLHGHAMYAKPGLVLQGSGS--IGIRNDTAKSKKFIDTGTNSLVVAAEYLGM 515

Query: 166 GVITEPPWLNFAREWGPKIDYDLDTELRKIEKFLPGKLKKAFKQIVQSLPSEVLG 2
             ITEPPWLN+ R+WGPK+ YD+  E++K+EK LPGKLK AF + V+SLPSEVLG
Sbjct: 516 A-ITEPPWLNYFRKWGPKLTYDIAEEIKKVEKLLPGKLKSAFDKFVRSLPSEVLG 569


>ref|XP_002880101.1| hypothetical protein ARALYDRAFT_483550 [Arabidopsis lyrata subsp.
           lyrata] gi|297325940|gb|EFH56360.1| hypothetical protein
           ARALYDRAFT_483550 [Arabidopsis lyrata subsp. lyrata]
          Length = 564

 Score =  151 bits (381), Expect = 6e-35
 Identities = 69/114 (60%), Positives = 91/114 (79%)
 Frame = -1

Query: 343 NKVVTYSSLHGHASYSKPGMVLQGNTKLGIGIRNDTAKSKNVLDTGVRYEVVSADYLGSG 164
           NK V Y+SLHGHA Y KPG+VLQG+   G+GIRNDTAK K V+DTG+ YEV++A+Y G G
Sbjct: 436 NKFVAYASLHGHAMYPKPGLVLQGDD--GVGIRNDTAKGKKVIDTGLGYEVIAAEYDGGG 493

Query: 163 VITEPPWLNFAREWGPKIDYDLDTELRKIEKFLPGKLKKAFKQIVQSLPSEVLG 2
           V+ EPPW+N+ R+WGPKIDY++D E++ +E+ LPG LKKAF + V+ +P EV G
Sbjct: 494 VV-EPPWVNYFRKWGPKIDYNVDDEVKSVERILPGLLKKAFVKFVKKIPDEVYG 546


>ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|222866459|gb|EEF03590.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  149 bits (377), Expect = 2e-34
 Identities = 72/115 (62%), Positives = 87/115 (75%)
 Frame = -1

Query: 346 GNKVVTYSSLHGHASYSKPGMVLQGNTKLGIGIRNDTAKSKNVLDTGVRYEVVSADYLGS 167
           GNK V YSSL+GHA Y+KPG+VLQG+    IGIRNDTAKS   +DTG R+ VVSA+Y+GS
Sbjct: 417 GNKAVIYSSLNGHAMYAKPGLVLQGSGN--IGIRNDTAKSNKFIDTGARFSVVSAEYMGS 474

Query: 166 GVITEPPWLNFAREWGPKIDYDLDTELRKIEKFLPGKLKKAFKQIVQSLPSEVLG 2
            V+ EPPWLN+ R+WGP I YDL  E   +EK LPGKLK AF + V+SLP E+ G
Sbjct: 475 SVV-EPPWLNYLRKWGPNITYDLAEEAETVEKLLPGKLKSAFDKFVKSLPKEIFG 528


Top