BLASTX nr result
ID: Coptis25_contig00033925
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00033925 (342 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003548375.1| PREDICTED: ABC transporter B family member 1... 91 1e-16 ref|XP_002331205.1| multidrug/pheromone exporter, MDR family, AB... 89 3e-16 ref|XP_002529182.1| multidrug resistance protein 1, 2, putative ... 88 8e-16 ref|XP_003632759.1| PREDICTED: ABC transporter B family member 1... 87 1e-15 ref|XP_004155963.1| PREDICTED: ABC transporter B family member 1... 87 2e-15 >ref|XP_003548375.1| PREDICTED: ABC transporter B family member 19-like [Glycine max] Length = 1515 Score = 90.5 bits (223), Expect = 1e-16 Identities = 51/104 (49%), Positives = 62/104 (59%), Gaps = 6/104 (5%) Frame = -3 Query: 340 GSRHYKS----TYDQHSIT--GGHDDKGRSMGHHYDSGLXXXXXXXXDMESGRGTKSVGL 179 GS+ Y+S TY H I +D++G D E R K+VG+ Sbjct: 237 GSQIYRSGGDYTYSHHDIEKLSAYDEEGEE---------------DMDEEDARPPKTVGI 281 Query: 178 LGLFKYSSKFDMILVFFGCLGALINGGSLPWYSYLFGDFVNKIA 47 LFKYS+K D++LVF GCLGALINGGSLPWYSYLFGD VNKI+ Sbjct: 282 FSLFKYSTKLDLVLVFVGCLGALINGGSLPWYSYLFGDVVNKIS 325 >ref|XP_002331205.1| multidrug/pheromone exporter, MDR family, ABC transporter family [Populus trichocarpa] gi|222873326|gb|EEF10457.1| multidrug/pheromone exporter, MDR family, ABC transporter family [Populus trichocarpa] Length = 1547 Score = 89.4 bits (220), Expect = 3e-16 Identities = 39/49 (79%), Positives = 44/49 (89%) Frame = -3 Query: 193 KSVGLLGLFKYSSKFDMILVFFGCLGALINGGSLPWYSYLFGDFVNKIA 47 + VGL LFKYS+K+DM+LVF GCLGALINGGSLPWYSY FGDFVN+IA Sbjct: 319 RQVGLFSLFKYSTKWDMVLVFLGCLGALINGGSLPWYSYFFGDFVNRIA 367 >ref|XP_002529182.1| multidrug resistance protein 1, 2, putative [Ricinus communis] gi|223531360|gb|EEF33196.1| multidrug resistance protein 1, 2, putative [Ricinus communis] Length = 1580 Score = 87.8 bits (216), Expect = 8e-16 Identities = 38/49 (77%), Positives = 45/49 (91%) Frame = -3 Query: 193 KSVGLLGLFKYSSKFDMILVFFGCLGALINGGSLPWYSYLFGDFVNKIA 47 + VGL GLFKYS+K+D++LV GCLGALINGG+LPWYS+LFGDFVNKIA Sbjct: 348 RQVGLFGLFKYSTKWDIVLVILGCLGALINGGALPWYSFLFGDFVNKIA 396 >ref|XP_003632759.1| PREDICTED: ABC transporter B family member 19-like [Vitis vinifera] Length = 1542 Score = 87.4 bits (215), Expect = 1e-15 Identities = 48/104 (46%), Positives = 57/104 (54%), Gaps = 17/104 (16%) Frame = -3 Query: 307 HSITGGHDDKG---------RSMGHHYDSGLXXXXXXXXDM--------ESGRGTKSVGL 179 H GGH G +S HHYD+ + G +SVGL Sbjct: 252 HHHDGGHGHHGHGYHDHGVWKSTSHHYDTDEGYNDNDQDSAYDEDEDDEDDGMAPRSVGL 311 Query: 178 LGLFKYSSKFDMILVFFGCLGALINGGSLPWYSYLFGDFVNKIA 47 LF+YS+K D++LV GCLGALINGGSLPWYS LFG+FVNKIA Sbjct: 312 FSLFRYSTKSDILLVILGCLGALINGGSLPWYSLLFGNFVNKIA 355 >ref|XP_004155963.1| PREDICTED: ABC transporter B family member 19-like [Cucumis sativus] Length = 1450 Score = 86.7 bits (213), Expect = 2e-15 Identities = 37/50 (74%), Positives = 45/50 (90%) Frame = -3 Query: 193 KSVGLLGLFKYSSKFDMILVFFGCLGALINGGSLPWYSYLFGDFVNKIAT 44 K+VGL LFKYS+K D++L+ GCLGALINGGSLPWYSYLFG+FVN++AT Sbjct: 224 KAVGLFSLFKYSTKLDLLLIILGCLGALINGGSLPWYSYLFGNFVNQLAT 273