BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033908
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003565172.1| PREDICTED: DNA replication complex GINS prot...   246   1e-63
ref|XP_002463445.1| hypothetical protein SORBIDRAFT_02g043990 [S...   241   4e-62
gb|ACG26223.1| DNA replication complex GINS protein PSF2 [Zea mays]   241   4e-62
ref|NP_001147013.1| LOC100280623 [Zea mays] gi|195606464|gb|ACG2...   241   4e-62
ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group] g...   241   4e-62

>ref|XP_003565172.1| PREDICTED: DNA replication complex GINS protein PSF2-like
           [Brachypodium distachyon]
          Length = 212

 Score =  246 bits (629), Expect = 1e-63
 Identities = 116/134 (86%), Positives = 130/134 (97%)
 Frame = -2

Query: 404 ATEVPLWLAMALKKRGKCTIRPPEWMSIEKLTRVLEAERDSPREFQPLPFHYVEISKLLF 225
           A++VPLWLA+ALK+RGKCTIRPPEWM++E+LT+VL+AER+SPREFQPLPFHY+EISKLLF
Sbjct: 52  ASKVPLWLAVALKRRGKCTIRPPEWMTVERLTQVLDAERESPREFQPLPFHYIEISKLLF 111

Query: 224 DHARDDIPEIYMVRSLIEDIRDVRFHKVETGLQTISARTHAVKLKNLSAMEVNIVRPFFV 45
           DHARDDI + Y+VRSLIEDIRDVRFHKVETGL+TIS RTHAVKLKNLSAMEVNIVRPF V
Sbjct: 112 DHARDDISDAYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMV 171

Query: 44  RTLQAFYKHDSPQM 3
           RTLQAFYKHDSPQM
Sbjct: 172 RTLQAFYKHDSPQM 185


>ref|XP_002463445.1| hypothetical protein SORBIDRAFT_02g043990 [Sorghum bicolor]
           gi|241926822|gb|EER99966.1| hypothetical protein
           SORBIDRAFT_02g043990 [Sorghum bicolor]
          Length = 211

 Score =  241 bits (615), Expect = 4e-62
 Identities = 114/133 (85%), Positives = 127/133 (95%)
 Frame = -2

Query: 401 TEVPLWLAMALKKRGKCTIRPPEWMSIEKLTRVLEAERDSPREFQPLPFHYVEISKLLFD 222
           T+VPLWLA+ALKKR KCTIR P+WM++++LT+VLEAER+SPREFQPLPFHY+EISKLLFD
Sbjct: 53  TKVPLWLAVALKKRSKCTIRTPDWMTVDRLTQVLEAERESPREFQPLPFHYIEISKLLFD 112

Query: 221 HARDDIPEIYMVRSLIEDIRDVRFHKVETGLQTISARTHAVKLKNLSAMEVNIVRPFFVR 42
           HARDDI + Y+VRSLIEDIRDVRFHKVETGL+TIS RTHAVKLKNLSAMEVNIVRPF VR
Sbjct: 113 HARDDISDAYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVR 172

Query: 41  TLQAFYKHDSPQM 3
           TLQAFYKHDSPQM
Sbjct: 173 TLQAFYKHDSPQM 185


>gb|ACG26223.1| DNA replication complex GINS protein PSF2 [Zea mays]
          Length = 205

 Score =  241 bits (615), Expect = 4e-62
 Identities = 114/133 (85%), Positives = 127/133 (95%)
 Frame = -2

Query: 401 TEVPLWLAMALKKRGKCTIRPPEWMSIEKLTRVLEAERDSPREFQPLPFHYVEISKLLFD 222
           T+VPLWLA+ALKKR KCTIR P+WM++++LT+VLEAER+SPREFQPLPFHY+EISKLLFD
Sbjct: 47  TKVPLWLAVALKKRSKCTIRTPDWMTVDRLTQVLEAERESPREFQPLPFHYIEISKLLFD 106

Query: 221 HARDDIPEIYMVRSLIEDIRDVRFHKVETGLQTISARTHAVKLKNLSAMEVNIVRPFFVR 42
           HARDDI + Y+VRSLIEDIRDVRFHKVETGL+TIS RTHAVKLKNLSAMEVNIVRPF VR
Sbjct: 107 HARDDISDAYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVR 166

Query: 41  TLQAFYKHDSPQM 3
           TLQAFYKHDSPQM
Sbjct: 167 TLQAFYKHDSPQM 179


>ref|NP_001147013.1| LOC100280623 [Zea mays] gi|195606464|gb|ACG25062.1| DNA replication
           complex GINS protein PSF2 [Zea mays]
          Length = 211

 Score =  241 bits (615), Expect = 4e-62
 Identities = 114/133 (85%), Positives = 127/133 (95%)
 Frame = -2

Query: 401 TEVPLWLAMALKKRGKCTIRPPEWMSIEKLTRVLEAERDSPREFQPLPFHYVEISKLLFD 222
           T+VPLWLA+ALKKR KCTIR P+WM++++LT+VLEAER+SPREFQPLPFHY+EISKLLFD
Sbjct: 53  TKVPLWLAVALKKRSKCTIRTPDWMTVDRLTQVLEAERESPREFQPLPFHYIEISKLLFD 112

Query: 221 HARDDIPEIYMVRSLIEDIRDVRFHKVETGLQTISARTHAVKLKNLSAMEVNIVRPFFVR 42
           HARDDI + Y+VRSLIEDIRDVRFHKVETGL+TIS RTHAVKLKNLSAMEVNIVRPF VR
Sbjct: 113 HARDDISDAYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMVR 172

Query: 41  TLQAFYKHDSPQM 3
           TLQAFYKHDSPQM
Sbjct: 173 TLQAFYKHDSPQM 185


>ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group]
           gi|11320850|dbj|BAB18333.1| putative DNA replication
           complex GINS protein PSF2 [Oryza sativa Japonica Group]
           gi|113532116|dbj|BAF04499.1| Os01g0248600 [Oryza sativa
           Japonica Group] gi|215686405|dbj|BAG87690.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704757|dbj|BAG94785.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 211

 Score =  241 bits (615), Expect = 4e-62
 Identities = 113/134 (84%), Positives = 129/134 (96%)
 Frame = -2

Query: 404 ATEVPLWLAMALKKRGKCTIRPPEWMSIEKLTRVLEAERDSPREFQPLPFHYVEISKLLF 225
           A++VPLWLA+ALKKRGKCTIR P+WM++++LT+VL+AER+SP+EFQPLPFHY+EISKLLF
Sbjct: 52  ASKVPLWLAVALKKRGKCTIRTPDWMTVDRLTQVLDAERESPKEFQPLPFHYIEISKLLF 111

Query: 224 DHARDDIPEIYMVRSLIEDIRDVRFHKVETGLQTISARTHAVKLKNLSAMEVNIVRPFFV 45
           DHARDDI + Y+VRSLIEDIRDVRFHKVETGL+TIS RTHAVKLKNLSAMEVNIVRPF V
Sbjct: 112 DHARDDISDAYLVRSLIEDIRDVRFHKVETGLETISGRTHAVKLKNLSAMEVNIVRPFMV 171

Query: 44  RTLQAFYKHDSPQM 3
           RTLQAFYKHDSPQM
Sbjct: 172 RTLQAFYKHDSPQM 185