BLASTX nr result

ID: Coptis25_contig00033906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033906
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629669.1| hypothetical protein MTR_8g085280 [Medicago ...    98   6e-19
ref|XP_003532744.1| PREDICTED: uncharacterized protein LOC100780...    97   2e-18
gb|AAQ62582.1| unknown [Glycine max]                                   97   2e-18
ref|XP_002518058.1| conserved hypothetical protein [Ricinus comm...    96   2e-18
gb|EEE60127.1| hypothetical protein OsJ_13005 [Oryza sativa Japo...    90   2e-16

>ref|XP_003629669.1| hypothetical protein MTR_8g085280 [Medicago truncatula]
           gi|355523691|gb|AET04145.1| hypothetical protein
           MTR_8g085280 [Medicago truncatula]
          Length = 2812

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
 Frame = -2

Query: 312 LRHPLVLHYFLVPPDAGQIVKITSERIIGYLVEYMDRSNVKAVK-TDEFLEFIAGKKRVQ 136
           LRHPLV+HYF V  +  ++ KITSE II +L E++D S  KAV   +EFLEFIA K+ V+
Sbjct: 219 LRHPLVIHYFSVRSNVAEVCKITSEEIIQFLSEFLDVSKAKAVVGVEEFLEFIAKKRSVE 278

Query: 135 VKENLGIRIQNLRLHINLIREARNKEDSTISSYLQSM 25
             E LGIRIQNL +HI  I+EAR  E ST+   L+++
Sbjct: 279 SMELLGIRIQNLGMHIAAIKEARKSEQSTLEKCLKTL 315


>ref|XP_003532744.1| PREDICTED: uncharacterized protein LOC100780184 [Glycine max]
          Length = 2785

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
 Frame = -2

Query: 312 LRHPLVLHYFLVPPDAGQIVKITSERIIGYLVEYMD--RSNVKAVKTDEFLEFIAGKKRV 139
           LRHPLV+HYF +  D  Q+ KIT+E II  L+E++D  RSN + +K ++FL+FIA K+ V
Sbjct: 184 LRHPLVIHYFSLRSDVTQVYKITTEEIIQLLIEFLDASRSN-EFIKVEQFLDFIANKRLV 242

Query: 138 QVKENLGIRIQNLRLHINLIREARNKEDSTI 46
           + KE LGIRIQNL +HI  IREARN E S +
Sbjct: 243 ECKEWLGIRIQNLGMHIYAIREARNSEQSAM 273


>gb|AAQ62582.1| unknown [Glycine max]
          Length = 2711

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
 Frame = -2

Query: 312 LRHPLVLHYFLVPPDAGQIVKITSERIIGYLVEYMD--RSNVKAVKTDEFLEFIAGKKRV 139
           LRHPLV+HYF +  D  Q+ KIT+E II  L+E++D  RSN + +K ++FL+FIA K+ V
Sbjct: 184 LRHPLVIHYFSLRSDVTQVYKITTEEIIQLLIEFLDASRSN-EFIKVEQFLDFIANKRLV 242

Query: 138 QVKENLGIRIQNLRLHINLIREARNKEDSTI 46
           + KE LGIRIQNL +HI  IREARN E S +
Sbjct: 243 ECKEWLGIRIQNLGMHIYAIREARNSEQSAM 273


>ref|XP_002518058.1| conserved hypothetical protein [Ricinus communis]
           gi|223542654|gb|EEF44191.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2833

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/106 (49%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
 Frame = -2

Query: 315 LLRHPLVLHYFLVPPDAGQIVKITSERIIGYLVEYMDRSNVKAVKTDEFLEFIAGKKRVQ 136
           LLRHPLVLHYF V  DA +++KIT+E II  L EYM     K +  DEFL+FI  K+ V 
Sbjct: 315 LLRHPLVLHYFSVSCDATEVLKITTEDIILTLHEYMGTFKEKDITADEFLDFIVKKRSVN 374

Query: 135 VKENLGIRIQNLRLHINLIREARNKEDSTISSYLQSM--PKEKTET 4
            K NLG+RIQ L +HI  I+EA+  +++T+   L SM  P +++ T
Sbjct: 375 GKGNLGVRIQGLGMHIKFIQEAKRSKNTTLKKCLSSMRAPSKRSGT 420


>gb|EEE60127.1| hypothetical protein OsJ_13005 [Oryza sativa Japonica Group]
          Length = 2821

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/89 (48%), Positives = 63/89 (70%)
 Frame = -2

Query: 312 LRHPLVLHYFLVPPDAGQIVKITSERIIGYLVEYMDRSNVKAVKTDEFLEFIAGKKRVQV 133
           L+HPLV HYF VP D   + K++S+ II +L ++MD S  K +  + FL+++A +K V  
Sbjct: 275 LQHPLVAHYFSVPADLSLVPKLSSDEIINWLQKFMDNSK-KKITVENFLDYLAEQKSVSG 333

Query: 132 KENLGIRIQNLRLHINLIREARNKEDSTI 46
           KENLG+RIQ+LRLHI+ +R+AR  E S +
Sbjct: 334 KENLGVRIQSLRLHISFLRQARRTEVSAV 362


Top