BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033899
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76772.1| unknown [Picea sitchensis]                             115   3e-24
ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   115   5e-24
ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23

>gb|ADE76772.1| unknown [Picea sitchensis]
          Length = 232

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/98 (53%), Positives = 73/98 (74%)
 Frame = -1

Query: 301 HAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAFSHHGC 122
           H  +IK+GFESDV + +++I MYAKC  +GD+ K F   M+ R+V++WN+MI+A++ HGC
Sbjct: 53  HLYIIKSGFESDVFVGSTLIDMYAKCSSIGDASKVFDG-MSTRNVVSWNAMIAAYAIHGC 111

Query: 121 GRQALDTIAEMKIVGVKPNAITFLGALSACGHSGLVSE 8
           G+QALD   +MK     PN +TF+G LSAC H+GLVSE
Sbjct: 112 GKQALDLFEQMKHSDTSPNQVTFVGVLSACCHAGLVSE 149


>ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/100 (51%), Positives = 74/100 (74%)
 Frame = -1

Query: 307 QFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAFSHH 128
           Q H+ V+KTG++S+  +SNS+I++YAK G + D+ + F N M+ R+VI+WN+MI+ +S H
Sbjct: 686 QIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREF-NDMSERNVISWNAMITGYSQH 744

Query: 127 GCGRQALDTIAEMKIVGVKPNAITFLGALSACGHSGLVSE 8
           GCG +AL    EMK+ G+ PN +TF+G LSAC H GLV E
Sbjct: 745 GCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKE 784



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/97 (36%), Positives = 57/97 (58%)
 Frame = -1

Query: 322 LLLSLQFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMIS 143
           L L  Q H  VIKTGF+ +V + + +I MYAK G+L  +++  +    + DV++W +MI+
Sbjct: 479 LYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPED-DVVSWTAMIA 537

Query: 142 AFSHHGCGRQALDTIAEMKIVGVKPNAITFLGALSAC 32
            +  H    +AL    EM+  G++ + I F  A+SAC
Sbjct: 538 GYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC 574



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/99 (35%), Positives = 57/99 (57%)
 Frame = -1

Query: 316 LSLQFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAF 137
           L  Q H  VIK GF S+  + N ++ +Y++  +L  + + F +TMN+RD +++NS+IS  
Sbjct: 279 LGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIF-STMNSRDGVSYNSLISGL 337

Query: 136 SHHGCGRQALDTIAEMKIVGVKPNAITFLGALSACGHSG 20
              G   +AL+   +M+   +KP+ IT    LSAC   G
Sbjct: 338 VQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVG 376



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/91 (30%), Positives = 54/91 (59%)
 Frame = -1

Query: 307 QFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAFSHH 128
           Q HA+    GF +D++I+N++I++YA+CG + ++   F+  + +++ I+WNS++S  +  
Sbjct: 585 QIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK-IGDKNNISWNSLVSGLAQS 643

Query: 127 GCGRQALDTIAEMKIVGVKPNAITFLGALSA 35
           G   +AL     M     + N  T+  A+SA
Sbjct: 644 GYFEEALQVFVRMLRTEAEVNMFTYGSAISA 674



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/97 (29%), Positives = 47/97 (48%)
 Frame = -1

Query: 322 LLLSLQFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMIS 143
           L  +++ H  + K+GF+ +  + +S++  Y + G+   ++K F    +NR V +WN MI 
Sbjct: 74  LFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDEN-SNRSVFSWNKMIH 132

Query: 142 AFSHHGCGRQALDTIAEMKIVGVKPNAITFLGALSAC 32
            F       Q       M   G+ PN  TF G L AC
Sbjct: 133 VFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKAC 169



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/97 (25%), Positives = 49/97 (50%)
 Frame = -1

Query: 310 LQFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAFSH 131
           +Q H+  IK G  +D+ +  S++ +Y+KC ++  + K F  T    +++ WN M+ A+  
Sbjct: 382 MQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXT-ETENIVLWNVMLVAYGQ 440

Query: 130 HGCGRQALDTIAEMKIVGVKPNAITFLGALSACGHSG 20
                 + +   +M++ G+ PN  T+   L  C   G
Sbjct: 441 LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLG 477


>ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/100 (51%), Positives = 74/100 (74%)
 Frame = -1

Query: 307 QFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAFSHH 128
           Q H+ V+KTG++S+  +SNS+I++YAK G + D+ + F N M+ R+VI+WN+MI+ +S H
Sbjct: 686 QIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREF-NDMSERNVISWNAMITGYSQH 744

Query: 127 GCGRQALDTIAEMKIVGVKPNAITFLGALSACGHSGLVSE 8
           GCG +AL    EMK+ G+ PN +TF+G LSAC H GLV E
Sbjct: 745 GCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKE 784



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/97 (36%), Positives = 57/97 (58%)
 Frame = -1

Query: 322 LLLSLQFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMIS 143
           L L  Q H  VIKTGF+ +V + + +I MYAK G+L  +++  +    + DV++W +MI+
Sbjct: 479 LYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPED-DVVSWTAMIA 537

Query: 142 AFSHHGCGRQALDTIAEMKIVGVKPNAITFLGALSAC 32
            +  H    +AL    EM+  G++ + I F  A+SAC
Sbjct: 538 GYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISAC 574



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/99 (35%), Positives = 57/99 (57%)
 Frame = -1

Query: 316 LSLQFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAF 137
           L  Q H  VIK GF S+  + N ++ +Y++  +L  + + F +TMN+RD +++NS+IS  
Sbjct: 279 LGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIF-STMNSRDGVSYNSLISGL 337

Query: 136 SHHGCGRQALDTIAEMKIVGVKPNAITFLGALSACGHSG 20
              G   +AL+   +M+   +KP+ IT    LSAC   G
Sbjct: 338 VQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVG 376



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/91 (30%), Positives = 54/91 (59%)
 Frame = -1

Query: 307 QFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAFSHH 128
           Q HA+    GF +D++I+N++I++YA+CG + ++   F+  + +++ I+WNS++S  +  
Sbjct: 585 QIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK-IGDKNNISWNSLVSGLAQS 643

Query: 127 GCGRQALDTIAEMKIVGVKPNAITFLGALSA 35
           G   +AL     M     + N  T+  A+SA
Sbjct: 644 GYFEEALQVFVRMLRTEAEVNMFTYGSAISA 674



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/97 (29%), Positives = 47/97 (48%)
 Frame = -1

Query: 322 LLLSLQFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMIS 143
           L  +++ H  + K+GF+ +  + +S++  Y + G+   ++K F    +NR V +WN MI 
Sbjct: 74  LFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDEN-SNRSVFSWNKMIH 132

Query: 142 AFSHHGCGRQALDTIAEMKIVGVKPNAITFLGALSAC 32
            F       Q       M   G+ PN  TF G L AC
Sbjct: 133 VFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKAC 169



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/97 (25%), Positives = 49/97 (50%)
 Frame = -1

Query: 310 LQFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAFSH 131
           +Q H+  IK G  +D+ +  S++ +Y+KC ++  + K F  T    +++ WN M+ A+  
Sbjct: 382 MQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTT-ETENIVLWNVMLVAYGQ 440

Query: 130 HGCGRQALDTIAEMKIVGVKPNAITFLGALSACGHSG 20
                 + +   +M++ G+ PN  T+   L  C   G
Sbjct: 441 LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLG 477


>ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/101 (52%), Positives = 72/101 (71%)
 Frame = -1

Query: 307 QFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAFSHH 128
           Q HA+ IKTGF SDV +S S+I+MY+KCG +  + K F   M+ R +I W SMI+ FS H
Sbjct: 402 QIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLE-MSTRTMIAWTSMITGFSQH 460

Query: 127 GCGRQALDTIAEMKIVGVKPNAITFLGALSACGHSGLVSEA 5
           G  +QAL    +M + GV+PNA+TF+G LSAC H+G+VS+A
Sbjct: 461 GMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQA 501



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/97 (38%), Positives = 59/97 (60%)
 Frame = -1

Query: 322 LLLSLQFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMIS 143
           L L  QFHA +IK   + D ++ +++ ++Y+KCG L D++KTF + +  ++VI+W S +S
Sbjct: 184 LKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTF-SRIREKNVISWTSAVS 242

Query: 142 AFSHHGCGRQALDTIAEMKIVGVKPNAITFLGALSAC 32
           A + +G   + L    EM  V +KPN  T   ALS C
Sbjct: 243 ACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQC 279



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/90 (30%), Positives = 46/90 (51%)
 Frame = -1

Query: 301 HAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAFSHHGC 122
           H  V+KTG   +  + + ++ +YAKCG + D+ + F N M  R+V+ W +++  F  +  
Sbjct: 90  HGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDN-MLRRNVVAWTTLMVGFVQNSQ 148

Query: 121 GRQALDTIAEMKIVGVKPNAITFLGALSAC 32
            + A+    EM   G  P+  T    L AC
Sbjct: 149 PKHAIHVFQEMLYAGSYPSVYTLSAVLHAC 178



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
 Frame = -1

Query: 322 LLLSLQFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMIS 143
           L L  Q ++  IK G+ES++ + NS++ +Y K G + ++ + F N M++  ++TWN+MI+
Sbjct: 285 LELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLF-NRMDDASMVTWNAMIA 343

Query: 142 AFSH---------HGC--GRQALDTIAEMKIVGVKPNAITFLGALSAC 32
             +            C  G +AL   +++ + G+KP+  T    LS C
Sbjct: 344 GHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVC 391


>ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/101 (51%), Positives = 70/101 (69%)
 Frame = -1

Query: 307 QFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAFSHH 128
           Q HA+ IKTGF SDV +S S+I+MY KCG +  + K F   M+ R +I W SMI+ FS H
Sbjct: 399 QIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLE-MSTRTMIAWTSMITGFSQH 457

Query: 127 GCGRQALDTIAEMKIVGVKPNAITFLGALSACGHSGLVSEA 5
           G  +QAL    +M + GV+PN +TF+G LSAC H+G+VS+A
Sbjct: 458 GMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQA 498



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/97 (36%), Positives = 56/97 (57%)
 Frame = -1

Query: 322 LLLSLQFHAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMIS 143
           L L  QFHA +IK   + D ++ +++ ++Y+KCG L D++K F + +  ++VI+W S +S
Sbjct: 181 LKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAF-SRIREKNVISWTSAVS 239

Query: 142 AFSHHGCGRQALDTIAEMKIVGVKPNAITFLGALSAC 32
           A   +G   + L    EM    +KPN  T   ALS C
Sbjct: 240 ACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQC 276



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/90 (30%), Positives = 47/90 (52%)
 Frame = -1

Query: 301 HAEVIKTGFESDVAISNSIITMYAKCGELGDSIKTFQNTMNNRDVITWNSMISAFSHHGC 122
           H  V+KTG   +  + + ++ +YAKCG + D+ + F+N M  R+V+ W +++  F  +  
Sbjct: 87  HGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFEN-MPRRNVVAWTTLMVGFVQNSQ 145

Query: 121 GRQALDTIAEMKIVGVKPNAITFLGALSAC 32
            + A+    EM   G  P+  T    L AC
Sbjct: 146 PKHAIHVFQEMLYAGSYPSIYTLSAVLHAC 175