BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033895
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40086.3| unnamed protein product [Vitis vinifera]               59   3e-07
ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...    59   3e-07
ref|XP_002514971.1| conserved hypothetical protein [Ricinus comm...    59   4e-07
ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
emb|CBI27542.3| unnamed protein product [Vitis vinifera]               57   2e-06

>emb|CBI40086.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
 Frame = +1

Query: 133 FVKDFPEKNAVSGFSGYGKLNSLDCWKD------------AAPVESVSTDIIERLPPDPF 276
           FV  F +K+      G+G L ++DC  D                E+VS DI++RLP DPF
Sbjct: 23  FVDGFGDKS----LDGFGNLLNMDCESDNPQDRRMGKSEKEGSCEAVSDDIVDRLPADPF 78

Query: 277 GMGIGATFTAITGWVEDFDPDEFNMFLNKTLKFQTE 384
            M I  TFTA  GWV DF+ D     + +    + E
Sbjct: 79  NMDIRTTFTAFKGWVGDFEKDSIGFGVGEMEAMEAE 114


>ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 480

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
 Frame = +1

Query: 133 FVKDFPEKNAVSGFSGYGKLNSLDCWKD------------AAPVESVSTDIIERLPPDPF 276
           FV  F +K+      G+G L ++DC  D                E+VS DI++RLP DPF
Sbjct: 23  FVDGFGDKS----LDGFGNLLNMDCESDNPQDRRMGKSEKEGSCEAVSDDIVDRLPADPF 78

Query: 277 GMGIGATFTAITGWVEDFDPDEFNMFLNKTLKFQTE 384
            M I  TFTA  GWV DF+ D     + +    + E
Sbjct: 79  NMDIRTTFTAFKGWVGDFEKDSIGFGVGEMEAMEAE 114


>ref|XP_002514971.1| conserved hypothetical protein [Ricinus communis]
           gi|223546022|gb|EEF47525.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 483

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 20/83 (24%)
 Frame = +1

Query: 229 ESVSTDIIERLPPDPFGMGIGATFTAITGWVEDFDPD--------------------EFN 348
           ESV  DI++ LP DPFGM I  TFTA+TGW+ED + D                      N
Sbjct: 57  ESVHKDILDLLPSDPFGMDISTTFTALTGWLEDLEMDYTGYSSDQVATSDGSYQLFAGLN 116

Query: 349 MFLNKTLKFQTETGSMEFCRRSN 417
              +  ++FQ   GSM F  RSN
Sbjct: 117 FIWSNAMRFQNFPGSMRFDCRSN 139


>ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|222864676|gb|EEF01807.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
 Frame = +1

Query: 229 ESVSTDIIERLPPDPFGMGIGATFTAITGWVEDFDPD--------------------EFN 348
           ESV  DI++ LP DPFGM I  TFTA+TGW+ED + D                    + N
Sbjct: 46  ESVHKDILDLLPSDPFGMDISTTFTAVTGWLEDLEVDYGGYGRDRVSTRDGNYQLFADLN 105

Query: 349 MFLNKTLKFQTETGSMEFCRRSNLSDTLDGNVDKLS 456
              N  + FQ   G+M F    +LS+ + G  D+ S
Sbjct: 106 FICNNAMWFQQFPGNMGF----DLSNVVGGYGDERS 137


>emb|CBI27542.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = +1

Query: 229 ESVSTDIIERLPPDPFGMGIGATFTAITGWVEDFDPD 339
           ESVS DI++ LP DPFGM I  TFTAITGW+ED + D
Sbjct: 50  ESVSNDILDLLPSDPFGMDISTTFTAITGWLEDLEVD 86