BLASTX nr result

ID: Coptis25_contig00033843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033843
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272177.2| PREDICTED: vacuolar protein sorting-associat...    92   6e-17
emb|CBI39019.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_002526977.1| vacuolar protein sorting, putative [Ricinus ...    85   7e-15
ref|XP_002317064.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_003547564.1| PREDICTED: vacuolar protein sorting-associat...    80   2e-13

>ref|XP_002272177.2| PREDICTED: vacuolar protein sorting-associated protein 54-like
           [Vitis vinifera]
          Length = 1041

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/73 (68%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
 Frame = -3

Query: 200 PLIIGLLRT-------RIYRDTLVADMKTASKTTVAEFLPILVARLLESDLTTSERSVDT 42
           P IIGLLRT       RIYRDTL ADMKTA KT VAE LP+LVAR L+SD    ER VD 
Sbjct: 386 PFIIGLLRTAKLPSVLRIYRDTLTADMKTAIKTAVAELLPVLVARPLDSDFAPGERMVDA 445

Query: 41  DGGGSSIASKLRN 3
           DGGGSS+ASKLR+
Sbjct: 446 DGGGSSLASKLRS 458


>emb|CBI39019.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/73 (68%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
 Frame = -3

Query: 200 PLIIGLLRT-------RIYRDTLVADMKTASKTTVAEFLPILVARLLESDLTTSERSVDT 42
           P IIGLLRT       RIYRDTL ADMKTA KT VAE LP+LVAR L+SD    ER VD 
Sbjct: 283 PFIIGLLRTAKLPSVLRIYRDTLTADMKTAIKTAVAELLPVLVARPLDSDFAPGERMVDA 342

Query: 41  DGGGSSIASKLRN 3
           DGGGSS+ASKLR+
Sbjct: 343 DGGGSSLASKLRS 355


>ref|XP_002526977.1| vacuolar protein sorting, putative [Ricinus communis]
           gi|223533668|gb|EEF35404.1| vacuolar protein sorting,
           putative [Ricinus communis]
          Length = 1046

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/73 (61%), Positives = 53/73 (72%), Gaps = 7/73 (9%)
 Frame = -3

Query: 200 PLIIGLLRT-------RIYRDTLVADMKTASKTTVAEFLPILVARLLESDLTTSERSVDT 42
           P I+GLLRT       R+YRDTL  DMKTA KT VAE LP+LVAR LESD T  ER+V+T
Sbjct: 390 PHIVGLLRTAKLPSLLRLYRDTLTTDMKTAIKTAVAELLPVLVARPLESDFTPGERTVET 449

Query: 41  DGGGSSIASKLRN 3
           DGG  S+ SKL++
Sbjct: 450 DGGNLSLGSKLKS 462


>ref|XP_002317064.1| predicted protein [Populus trichocarpa] gi|222860129|gb|EEE97676.1|
           predicted protein [Populus trichocarpa]
          Length = 830

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 45/73 (61%), Positives = 51/73 (69%), Gaps = 7/73 (9%)
 Frame = -3

Query: 200 PLIIGLLRT-------RIYRDTLVADMKTASKTTVAEFLPILVARLLESDLTTSERSVDT 42
           PLI+GLLRT       RIYRDTL A MK   K  VAE LP   A+ LESDLT +ER+ DT
Sbjct: 206 PLIVGLLRTAKLPPVLRIYRDTLTASMKNTIKNAVAELLPTFSAQSLESDLTPAERTADT 265

Query: 41  DGGGSSIASKLRN 3
           DGGG S+ASKLR+
Sbjct: 266 DGGGLSLASKLRS 278


>ref|XP_003547564.1| PREDICTED: vacuolar protein sorting-associated protein 54-like
           [Glycine max]
          Length = 1029

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 7/73 (9%)
 Frame = -3

Query: 200 PLIIGLLRT-------RIYRDTLVADMKTASKTTVAEFLPILVARLLESDLTTSERSVDT 42
           P +IGLLRT       R YRDTL ADMK+A KT VAE LP+L +R  ES+  + +R+VD 
Sbjct: 373 PTVIGLLRTAKLPSVLRTYRDTLTADMKSAIKTAVAELLPVLASRGSESEFFSGDRAVDA 432

Query: 41  DGGGSSIASKLRN 3
           DGGG+S+ASKLR+
Sbjct: 433 DGGGASLASKLRS 445


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