BLASTX nr result

ID: Coptis25_contig00033838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033838
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298799.1| predicted protein [Populus trichocarpa] gi|1...    55   6e-06

>ref|XP_002298799.1| predicted protein [Populus trichocarpa] gi|118481671|gb|ABK92776.1|
           unknown [Populus trichocarpa]
           gi|222846057|gb|EEE83604.1| predicted protein [Populus
           trichocarpa]
          Length = 153

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/53 (50%), Positives = 35/53 (66%)
 Frame = +3

Query: 48  VNFFLSLLLPYCIYYVILYENKVGFGILIFKTADHTKWIGAFQRKQDFIDVVE 206
           VN+F   L+P  +++   +  K+  G     TADHTKW+GAF RKQDFIDVVE
Sbjct: 74  VNYFDITLVPSTVFFFNAHHMKMDSG-----TADHTKWVGAFHRKQDFIDVVE 121


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