BLASTX nr result

ID: Coptis25_contig00033832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033832
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002527040.1| conserved hypothetical protein [Ricinus comm...    79   3e-13
ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216...    75   7e-12

>ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|222845736|gb|EEE83283.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/128 (39%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
 Frame = -3

Query: 386 PPVIHDKNPINIMEDLVRRLGESKKHSKDSGLQILEELLFSYANHGIQSLDSATSANSFL 207
           P  +  ++  + +E L + L E+ K S   GLQILEE+L SY N     LD   S     
Sbjct: 529 PSNVTIESQFDAIESLAQNLAEAMKKSNRMGLQILEEILLSYVN-----LDGQASTCGST 583

Query: 206 RPEALASQVTKAFCSNGYDMFAPLK-SLAQFNSDDEIQSATALVICTYIFSQNKRIQELV 30
            PE L+S++   F S G  +FAP   S++  +SD  I S T L+  ++I SQ++R+QE++
Sbjct: 584 FPETLSSRIADQFESVGNRLFAPFDVSISVPSSDSGIHSPTILIARSFILSQHERLQEML 643

Query: 29  LFWSKNGY 6
           LFWS+NG+
Sbjct: 644 LFWSRNGF 651


>ref|XP_002527040.1| conserved hypothetical protein [Ricinus communis]
           gi|223533602|gb|EEF35340.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 982

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
 Frame = -3

Query: 386 PPVIHDKNPINIMEDLVRRLGESKKHSKDSGLQILEELLFSYANHGIQSLDSATSANSFL 207
           P +      ++ +E L++ L ++ K S   GLQILE  L S+ N     LD+   A   +
Sbjct: 488 PSISTSDTQVDAIESLLKNLTDAMKKSNKMGLQILEATLLSFLN-----LDNKVPALVSI 542

Query: 206 RPEALASQVTKAFCSNGYDMFAPLKSLAQFN-SDDEIQSATALVICTYIFSQNKRIQELV 30
            PE L S++   F + G  +FAPL +      S  EI SATALV  T+IFSQ+ ++Q ++
Sbjct: 543 PPEVLCSRIADQFEAIGCKLFAPLDNGPNAPCSGYEISSATALVSRTFIFSQHDKMQRML 602

Query: 29  LFWSKNG 9
           LFWS+NG
Sbjct: 603 LFWSRNG 609


>ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216642 [Cucumis sativus]
          Length = 1058

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 46/115 (40%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
 Frame = -3

Query: 350 MEDLVRRLGESKKHSKDSGLQILEELLFSYANHGIQSLDSATSANSFLRPEALASQVTKA 171
           +E LV+ LGE  + S   GL+ LEELL  + +      D+A  +++   PE L+S++   
Sbjct: 536 IEILVKNLGEVTRKSYKMGLKTLEELLVLFLSLD----DNAQDSSTIFCPEILSSRILNT 591

Query: 170 FCSNGYDMFAPLKSLAQFNS-DDEIQSATALVICTYIFSQNKRIQELVLFWSKNG 9
           + S+G+ +F  L+      S DDEI+SATAL+I T+IF   K I +L+LF S+NG
Sbjct: 592 YNSSGHKLFCALELPPNGPSYDDEIESATALIIRTFIFHHEKNILQLLLFCSRNG 646


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