BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033819
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   146   4e-33
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   145   5e-33
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   144   1e-32
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   144   1e-32
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi...   143   3e-32

>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  146 bits (368), Expect = 4e-33
 Identities = 66/170 (38%), Positives = 102/170 (60%), Gaps = 2/170 (1%)
 Frame = -3

Query: 659  KKVTGWKSKILSQASRTTLVKAVGQAVPIYAMGVYSLPVSTCEKLDQINRNFWWNGVDKS 480
            +++ GWK K+LS+A +  L+KAV QA+P +AMG + L    C+++ ++   +WW+  +K 
Sbjct: 1003 QRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKD 1062

Query: 479  NAWHTLSWEKLCRAKINGGLGFRRARDMNTAMLTKHSWRMIQDADSIWARTFSSLY--KW 306
            N  H LSW KL   K  GGLGFR     N AML K  WR+IQD DS+ +R   + Y    
Sbjct: 1063 NKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLG 1122

Query: 305  DCFTQETVQKKESKSYFWKGVKKSLGAVREGFMWSLGNGSSIKTFTEPWL 156
            DCF     ++  + SY W+ ++K L  ++ G +W +G+GS I  + +PW+
Sbjct: 1123 DCFRP---KQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWI 1169


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  145 bits (367), Expect = 5e-33
 Identities = 66/170 (38%), Positives = 102/170 (60%), Gaps = 2/170 (1%)
 Frame = -3

Query: 659  KKVTGWKSKILSQASRTTLVKAVGQAVPIYAMGVYSLPVSTCEKLDQINRNFWWNGVDKS 480
            +++ GWK K+LS+A +  L+KAV QA+P +AMG + L    C+++ ++   +WW+  +K 
Sbjct: 1030 QRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKD 1089

Query: 479  NAWHTLSWEKLCRAKINGGLGFRRARDMNTAMLTKHSWRMIQDADSIWARTFSSLY--KW 306
            N  H LSW KL   K  GGLGFR     N AML K  WR+IQD DS+ +R   + Y    
Sbjct: 1090 NKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLG 1149

Query: 305  DCFTQETVQKKESKSYFWKGVKKSLGAVREGFMWSLGNGSSIKTFTEPWL 156
            DCF     ++  + SY W+ ++K L  ++ G +W +G+GS I  + +PW+
Sbjct: 1150 DCFRP---KQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWI 1196


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/170 (38%), Positives = 101/170 (59%), Gaps = 2/170 (1%)
 Frame = -3

Query: 659  KKVTGWKSKILSQASRTTLVKAVGQAVPIYAMGVYSLPVSTCEKLDQINRNFWWNGVDKS 480
            +++ GWK K+LS+A +  L+KAV Q +P +AMG + L    C+++ ++   +WW+  +K 
Sbjct: 975  QRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKD 1034

Query: 479  NAWHTLSWEKLCRAKINGGLGFRRARDMNTAMLTKHSWRMIQDADSIWARTFSSLY--KW 306
            N  H LSW KL   K  GGLGFR     N AML K  WR+IQD DS+ +R   + Y    
Sbjct: 1035 NKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLG 1094

Query: 305  DCFTQETVQKKESKSYFWKGVKKSLGAVREGFMWSLGNGSSIKTFTEPWL 156
            DCF     ++  + SY W+ ++K L  ++ G +W +G+GS I  + +PW+
Sbjct: 1095 DCFRP---KQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWI 1141


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/170 (38%), Positives = 101/170 (59%), Gaps = 2/170 (1%)
 Frame = -3

Query: 659  KKVTGWKSKILSQASRTTLVKAVGQAVPIYAMGVYSLPVSTCEKLDQINRNFWWNGVDKS 480
            +++ GWK K+LS+A +  L+KAV Q +P +AMG + L    C+++ ++   +WW+  +K 
Sbjct: 971  QRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKD 1030

Query: 479  NAWHTLSWEKLCRAKINGGLGFRRARDMNTAMLTKHSWRMIQDADSIWARTFSSLY--KW 306
            N  H LSW KL   K  GGLGFR     N AML K  WR+IQD DS+ +R   + Y    
Sbjct: 1031 NKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLG 1090

Query: 305  DCFTQETVQKKESKSYFWKGVKKSLGAVREGFMWSLGNGSSIKTFTEPWL 156
            DCF     ++  + SY W+ ++K L  ++ G +W +G+GS I  + +PW+
Sbjct: 1091 DCFRP---KQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWI 1137


>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score =  143 bits (360), Expect = 3e-32
 Identities = 79/222 (35%), Positives = 123/222 (55%), Gaps = 6/222 (2%)
 Frame = -3

Query: 659  KKVTGWKSKILSQASRTTLVKAVGQAVPIYAMGVYSLPVSTCEKLDQINRNFWWNGVDK- 483
            K++  W   +LS   +  L+K+V QA+P+Y MG++ LP S CE+L ++ RNFWW GV+K 
Sbjct: 1477 KRLIIWGENLLSSGGKEVLIKSVIQAIPVYVMGIFKLPESVCEELTKLTRNFWW-GVEKG 1535

Query: 482  SNAWHTLSWEKLCRAKINGGLGFRRARDMNTAMLTKHSWRMIQDADSIWARTFSSLYKWD 303
                H  SWE L R K NGGLGFR  R  N A+L + +WR+I + DS+ AR   + Y  +
Sbjct: 1536 KRKTHWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVLKAKYFPN 1595

Query: 302  CFTQETVQKKESKSYFWKGVKKSLGAVREGFMWSLGNGSSIKTFTEPWLLLNDKPVHLSD 123
                +T     + S  WK ++  L  ++EG +W +GNG S++ + +PWL           
Sbjct: 1596 GSLVDT-SFGGNASPVWKAIEYGLSLLKEGIIWRIGNGKSVRIWRDPWL----------- 1643

Query: 122  YVTDDFSFTAVERSG-----YVKDLVVNDTTEWNQERLGKLF 12
                DFS   + R G     +V DL +++   W++ R+ ++F
Sbjct: 1644 --PRDFSRRPITRKGNCRLKWVSDL-LSENGAWDETRVNQVF 1682



 Score =  127 bits (319), Expect = 2e-27
 Identities = 65/160 (40%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
 Frame = -3

Query: 659  KKVTGWKSKILSQASRTTLVKAVGQAVPIYAMGVYSLPVSTCEKLDQINRNFWWNGVDK- 483
            K++  W   +LS   +  L+K+V QA+P+Y MG++ LP S CE+L ++ RNFWW GV+K 
Sbjct: 779  KRLIIWGENLLSSGGKEVLIKSVIQAIPVYVMGIFKLPESVCEELTKLTRNFWW-GVEKG 837

Query: 482  SNAWHTLSWEKLCRAKINGGLGFRRARDMNTAMLTKHSWRMIQDADSIWARTFSSLYKWD 303
                H  SWE L R K NGGLGFR  R  N A+L + +WR+I + DS+ AR   + Y  +
Sbjct: 838  KRKTHWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVLKAKYFPN 897

Query: 302  CFTQETVQKKESKSYFWKGVKKSLGAVREGFMWSLGNGSS 183
                +T     + S  WK ++  L  ++EG +W +GNG S
Sbjct: 898  GSLVDT-SFGGNASPVWKAIEYGLSLLKEGIIWRIGNGKS 936