BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033811
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
ref|XP_002311462.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]        167   1e-39
dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]    166   2e-39
emb|CBI27010.3| unnamed protein product [Vitis vinifera]              166   2e-39

>ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/142 (57%), Positives = 105/142 (73%)
 Frame = -1

Query: 427 LVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMH 248
           LVSLLSAC+Q GALD+G+ IH+YI+E SVR D+ L +AL+DMY KCG I +A ++F RM 
Sbjct: 428 LVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMR 487

Query: 247 SKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYTNVLCACTHSGMVREGY 68
            K T +WNA++GGLA  G G+EA+ LF Q+ ++ D +PD +T   VLCACTH GMV EG 
Sbjct: 488 HKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGL 547

Query: 67  HLFNSMSSLYGITPTIEHYGCM 2
           H FN M +L GI P  EHYGC+
Sbjct: 548 HYFNLMLTL-GIVPDNEHYGCI 568



 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 49/124 (39%), Positives = 75/124 (60%)
 Frame = -1

Query: 427 LVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMH 248
           ++SLLSAC Q  A+D+G W++  ++E+ +  DV + NALI MYVKCG +  A + F  M 
Sbjct: 226 IISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMP 285

Query: 247 SKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYTNVLCACTHSGMVREGY 68
            ++T SWN L+ G   +G  +EAL +F +M   G   PD +T  +VL      G +++G 
Sbjct: 286 IRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDG-VIPDVITLVSVLSTYAQLGDLQQGR 344

Query: 67  HLFN 56
           +L N
Sbjct: 345 YLHN 348



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/119 (38%), Positives = 69/119 (57%)
 Frame = -1

Query: 427 LVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMH 248
           LVS+LS  AQ G L QG+++HNYI++H +  D+ L N+LI+MY KCG + +A  +F  M 
Sbjct: 327 LVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMA 386

Query: 247 SKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYTNVLCACTHSGMVREG 71
            +D  SW A++ G       R A  LF  M +V D     +   ++L AC+  G + +G
Sbjct: 387 RRDIVSWTAMVCGYVKGLQFRTAFNLFDDM-KVRDVMASEMALVSLLSACSQLGALDKG 444


>ref|XP_002311462.1| predicted protein [Populus trichocarpa] gi|222851282|gb|EEE88829.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score =  169 bits (428), Expect = 2e-40
 Identities = 76/142 (53%), Positives = 103/142 (72%)
 Frame = -1

Query: 427 LVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMH 248
           LV++LSACA+ GALD GKW+H Y E H  + +V + NAL+DMY KCG +++AL +F  M 
Sbjct: 249 LVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMD 308

Query: 247 SKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYTNVLCACTHSGMVREGY 68
           +KD  SWN ++GGLA+HGHG +AL LFS M+  G+  PD +T+  +LCACTH G+V +G+
Sbjct: 309 NKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGE-NPDGITFIGILCACTHMGLVEDGF 367

Query: 67  HLFNSMSSLYGITPTIEHYGCM 2
             F SM+  Y I P IEHYGC+
Sbjct: 368 SYFKSMTDDYSIVPRIEHYGCI 389



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/89 (33%), Positives = 44/89 (49%)
 Frame = -1

Query: 337 QDVCLGNALIDMYVKCGSIKSALQLFHRMHSKDTSSWNALMGGLAMHGHGREALILFSQM 158
           +DV   N +++ Y   G + +  +LF  M  ++  SWNAL+GG   +G   E L  F +M
Sbjct: 177 KDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRM 236

Query: 157 QRVGDTRPDCVTYTNVLCACTHSGMVREG 71
              G   P+  T  NVL AC   G +  G
Sbjct: 237 LVDGTVVPNDATLVNVLSACARLGALDLG 265


>gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
          Length = 582

 Score =  167 bits (422), Expect = 1e-39
 Identities = 74/142 (52%), Positives = 103/142 (72%)
 Frame = -1

Query: 427 LVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMH 248
           LV +L+ACAQ GAL+QGKW+H Y++ H ++ ++  G AL+DMY KCG ++ A+ +F RM 
Sbjct: 212 LVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQ 271

Query: 247 SKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYTNVLCACTHSGMVREGY 68
            K+  +W  ++ GLAMHG G EA++LF+QM+  G  RPD + +  VLCACTH+G+V +G 
Sbjct: 272 YKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSG-IRPDDIAFIGVLCACTHAGLVDKGR 330

Query: 67  HLFNSMSSLYGITPTIEHYGCM 2
            LF+SM   YGI P IEHYGCM
Sbjct: 331 ELFDSMVRKYGIKPKIEHYGCM 352



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/88 (37%), Positives = 46/88 (52%)
 Frame = -1

Query: 334 DVCLGNALIDMYVKCGSIKSALQLFHRMHSKDTSSWNALMGGLAMHGHGREALILFSQMQ 155
           D    N LI  Y + G +  A  LF  M +++  SW+A++ G    G GREAL +F++MQ
Sbjct: 142 DASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQ 201

Query: 154 RVGDTRPDCVTYTNVLCACTHSGMVREG 71
              D RPD      VL AC   G + +G
Sbjct: 202 -AEDVRPDDTVLVGVLAACAQHGALEQG 228


>dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 598

 Score =  166 bits (420), Expect = 2e-39
 Identities = 73/142 (51%), Positives = 102/142 (71%)
 Frame = -1

Query: 427 LVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMH 248
           LV +L+ACAQ GAL+QGKW+H Y++ +++R  V LG AL+DMY KCG ++  +++F  M 
Sbjct: 228 LVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMK 287

Query: 247 SKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYTNVLCACTHSGMVREGY 68
            K+  +W  ++ GLAMHG G ++L LFSQM+  G  +PD + +   LCACTH+G+V +G 
Sbjct: 288 DKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSG-VKPDDIAFIGALCACTHTGLVDKGR 346

Query: 67  HLFNSMSSLYGITPTIEHYGCM 2
            LFNSM + YGI P IEHYGCM
Sbjct: 347 ELFNSMVNNYGIKPKIEHYGCM 368



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/92 (38%), Positives = 46/92 (50%)
 Frame = -1

Query: 346 SVRQDVCLGNALIDMYVKCGSIKSALQLFHRMHSKDTSSWNALMGGLAMHGHGREALILF 167
           S   D    N LI  + + G +  A  LF  M  ++  SW+A++ G    G GREAL +F
Sbjct: 154 SAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVF 213

Query: 166 SQMQRVGDTRPDCVTYTNVLCACTHSGMVREG 71
           SQMQ  G  RPD      VL AC   G + +G
Sbjct: 214 SQMQAQG-VRPDDTVLVGVLAACAQLGALEQG 244


>emb|CBI27010.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/142 (54%), Positives = 102/142 (71%)
 Frame = -1

Query: 427 LVSLLSACAQTGALDQGKWIHNYIEEHSVRQDVCLGNALIDMYVKCGSIKSALQLFHRMH 248
           LV++LSACA+ GALD GKW+H Y E   ++ +V +GNAL+DMY KCG I++A+ +F  M 
Sbjct: 176 LVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMD 235

Query: 247 SKDTSSWNALMGGLAMHGHGREALILFSQMQRVGDTRPDCVTYTNVLCACTHSGMVREGY 68
           +KD  SWN L+GGLAMH  G +AL LF QM+  G  +PD +T+  +LCACTH G+V +G+
Sbjct: 236 TKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQ-KPDGITFIGILCACTHMGLVEDGF 294

Query: 67  HLFNSMSSLYGITPTIEHYGCM 2
             F SM+  Y I P IEHYGCM
Sbjct: 295 AYFQSMADDYLIMPQIEHYGCM 316



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
 Frame = -1

Query: 337 QDVCLGNALIDMYVKCGSIKSALQLFHRMHSKDTSSWNALMGGLAMHGHGREALILFSQM 158
           +DV   N ++  Y   G++++   LF  M  ++  SWNAL+GG A +G   E L  F +M
Sbjct: 104 RDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRM 163

Query: 157 QRVGDTRPDCVTYTNVLCACTHSGMVREG--YHLFNSMSSLYG 35
               D  P+  T   VL AC   G +  G   H++   S L G
Sbjct: 164 LSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKG 206