BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033801
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178260.1| pentatricopeptide repeat-containing protein [Ar...    66   7e-09
ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containi...    65   2e-08
gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indi...    64   4e-08
ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group] g...    61   3e-07
gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japo...    61   3e-07

>ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
           gi|3785980|gb|AAC67327.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250369|gb|AEC05463.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 584

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 34/86 (39%), Positives = 48/86 (55%)
 Frame = -1

Query: 767 YAASGLWGDXXXXXXXXXXXXXXXXAGYSSVESNGEIYVFHGGDRSHPLSTRIYDLLEEL 588
           YAA+G W                  A YSSVE  G+I+ F+ GD+SHP S  IY+ L+E+
Sbjct: 425 YAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEI 484

Query: 587 SRMIREISYVPITCATLHE*RINEFE 510
            + IR++ YVP TC+  H+  + E E
Sbjct: 485 LKKIRKMGYVPDTCSVFHDVEMEEKE 510


>ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 31/87 (35%), Positives = 47/87 (54%)
 Frame = -1

Query: 767 YAASGLWGDXXXXXXXXXXXXXXXXAGYSSVESNGEIYVFHGGDRSHPLSTRIYDLLEEL 588
           YA+S LW                   GYS +E NG++  FH GD+SHP++  I+D L+ L
Sbjct: 568 YASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRL 627

Query: 587 SRMIREISYVPITCATLHE*RINEFEK 507
            R ++E+ +VP T + LH+    E E+
Sbjct: 628 ERRLKEVGFVPYTESVLHDLNYEEKEE 654


>gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 34/87 (39%), Positives = 47/87 (54%)
 Frame = -1

Query: 767 YAASGLWGDXXXXXXXXXXXXXXXXAGYSSVESNGEIYVFHGGDRSHPLSTRIYDLLEEL 588
           YA +G+W D                 GYSS E  G+IY+F+ GD+SHP    IY  LE+L
Sbjct: 369 YAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKL 428

Query: 587 SRMIREISYVPITCATLHE*RINEFEK 507
              ++E  YVP T + LH+  ++E EK
Sbjct: 429 LERMQEAGYVPNTGSVLHD--LDEEEK 453


>ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
           gi|34394298|dbj|BAC84780.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza
           sativa Japonica Group]
          Length = 673

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 33/87 (37%), Positives = 46/87 (52%)
 Frame = -1

Query: 767 YAASGLWGDXXXXXXXXXXXXXXXXAGYSSVESNGEIYVFHGGDRSHPLSTRIYDLLEEL 588
           YA + +W D                 GYSS E  G+IY+F+ GD+SHP    IY  LE+L
Sbjct: 514 YAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKL 573

Query: 587 SRMIREISYVPITCATLHE*RINEFEK 507
              ++E  YVP T + LH+  ++E EK
Sbjct: 574 LERMQEAGYVPNTGSVLHD--LDEEEK 598


>gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
          Length = 674

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 33/87 (37%), Positives = 46/87 (52%)
 Frame = -1

Query: 767 YAASGLWGDXXXXXXXXXXXXXXXXAGYSSVESNGEIYVFHGGDRSHPLSTRIYDLLEEL 588
           YA + +W D                 GYSS E  G+IY+F+ GD+SHP    IY  LE+L
Sbjct: 515 YAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKL 574

Query: 587 SRMIREISYVPITCATLHE*RINEFEK 507
              ++E  YVP T + LH+  ++E EK
Sbjct: 575 LERMQEAGYVPNTGSVLHD--LDEEEK 599