BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033795
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   219   2e-55
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici...   212   3e-53
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...   207   5e-52
gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]                      207   9e-52
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-...   204   8e-51

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  219 bits (558), Expect = 2e-55
 Identities = 102/132 (77%), Positives = 120/132 (90%)
 Frame = +1

Query: 1   QCSKKVVKSGETKWQCERCNQDFEECDYRYLIQAAVQDHTGLTWVTAFQESGEEILGCSA 180
           QC+KKV +SG T+WQC+RCNQ+FE+CDYRYL+QA VQDHTGLTWVTAFQE+GEEILGCSA
Sbjct: 491 QCNKKVTRSGNTRWQCDRCNQEFEDCDYRYLLQAQVQDHTGLTWVTAFQEAGEEILGCSA 550

Query: 181 KELYSLKYEEQDDVRFEEIIRSSLFNQFLLKLKIKEEMYGDEQKVKITVVKAEKVDPSSE 360
           KELY LKYEE+DD RF EIIRS L NQFL +LKIKEEMYG+EQ+VKITVVKA+KV+ +SE
Sbjct: 551 KELYLLKYEEEDDFRFGEIIRSRLLNQFLFRLKIKEEMYGEEQRVKITVVKADKVNYTSE 610

Query: 361 SRYLLDII*RSP 396
           SR+LLD+I + P
Sbjct: 611 SRHLLDLISKCP 622


>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546518|gb|EEF48016.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 670

 Score =  212 bits (539), Expect = 3e-53
 Identities = 98/132 (74%), Positives = 114/132 (86%)
 Frame = +1

Query: 1   QCSKKVVKSGETKWQCERCNQDFEECDYRYLIQAAVQDHTGLTWVTAFQESGEEILGCSA 180
           QC+KKV  SG ++WQC+RCNQ+F+ECDYRYL+Q  +QDHTGLTWVTAFQESGEEILG  A
Sbjct: 537 QCNKKVTSSGNSRWQCDRCNQEFDECDYRYLLQVQIQDHTGLTWVTAFQESGEEILGLPA 596

Query: 181 KELYSLKYEEQDDVRFEEIIRSSLFNQFLLKLKIKEEMYGDEQKVKITVVKAEKVDPSSE 360
           KELY LKYE QDD +F ++IRS LF QFL +LKIKEEMYGDEQ+VKITVVKAEKV+ SSE
Sbjct: 597 KELYQLKYEMQDDTKFSDVIRSRLFQQFLFRLKIKEEMYGDEQRVKITVVKAEKVNYSSE 656

Query: 361 SRYLLDII*RSP 396
            RYLLD+I + P
Sbjct: 657 GRYLLDLISQCP 668


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 623

 Score =  207 bits (528), Expect = 5e-52
 Identities = 94/128 (73%), Positives = 116/128 (90%)
 Frame = +1

Query: 1   QCSKKVVKSGETKWQCERCNQDFEECDYRYLIQAAVQDHTGLTWVTAFQESGEEILGCSA 180
           QC+KKV +SG +KW C+RCNQ+FE+CDYRYL+QA +QDHTGLTWVTAFQE+GEEILG S 
Sbjct: 491 QCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSG 550

Query: 181 KELYSLKYEEQDDVRFEEIIRSSLFNQFLLKLKIKEEMYGDEQKVKITVVKAEKVDPSSE 360
           KELY LKYEEQDDV+F EIIRS +F+QFL +LKIKEE+YGDEQ+VK TVVKA++V+ SSE
Sbjct: 551 KELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYSSE 610

Query: 361 SRYLLDII 384
           S+Y+LD++
Sbjct: 611 SKYMLDLL 618


>gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
          Length = 637

 Score =  207 bits (526), Expect = 9e-52
 Identities = 92/128 (71%), Positives = 116/128 (90%)
 Frame = +1

Query: 1   QCSKKVVKSGETKWQCERCNQDFEECDYRYLIQAAVQDHTGLTWVTAFQESGEEILGCSA 180
           QC+KKV +SG+T+WQC+RCNQ+FEECDYRYL+QA +QDHTGLTWVTAFQE GEEI+G  A
Sbjct: 504 QCNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQIQDHTGLTWVTAFQEGGEEIMGYPA 563

Query: 181 KELYSLKYEEQDDVRFEEIIRSSLFNQFLLKLKIKEEMYGDEQKVKITVVKAEKVDPSSE 360
           KELY+LKYE++DD RF +I++S LFN F+ +LKIKEE+YG+EQKVK TVVKA+KV+ S+E
Sbjct: 564 KELYALKYEQEDDERFGDIVKSRLFNHFVFRLKIKEELYGEEQKVKSTVVKADKVNYSAE 623

Query: 361 SRYLLDII 384
           SRY+LD+I
Sbjct: 624 SRYMLDLI 631


>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 694

 Score =  204 bits (518), Expect = 8e-51
 Identities = 93/124 (75%), Positives = 113/124 (91%)
 Frame = +1

Query: 1   QCSKKVVKSGETKWQCERCNQDFEECDYRYLIQAAVQDHTGLTWVTAFQESGEEILGCSA 180
           QC+KKV +SG +KW C+RCNQ+FE+CDYRYL+QA +QDHTGLTWVTAFQE+GEEILG SA
Sbjct: 491 QCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTWVTAFQETGEEILGVSA 550

Query: 181 KELYSLKYEEQDDVRFEEIIRSSLFNQFLLKLKIKEEMYGDEQKVKITVVKAEKVDPSSE 360
           KELY LKYEEQDDV+F EIIRS +F+QFL +LKIKEE+YGDEQ+VK TVVKA++V+ SSE
Sbjct: 551 KELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQRVKNTVVKADRVNYSSE 610

Query: 361 SRYL 372
           S+Y+
Sbjct: 611 SKYI 614