BLASTX nr result

ID: Coptis25_contig00033785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033785
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283224.1| PREDICTED: G-type lectin S-receptor-like ser...   269   8e-70
ref|XP_002283186.1| PREDICTED: G-type lectin S-receptor-like ser...   269   8e-70
emb|CAN59769.1| hypothetical protein VITISV_011720 [Vitis vinifera]   264   3e-68
emb|CAN84023.1| hypothetical protein VITISV_004992 [Vitis vinifera]   262   1e-67
ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|2...   257   3e-66

>ref|XP_002283224.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
            kinase RLK1 [Vitis vinifera]
          Length = 816

 Score =  269 bits (687), Expect = 8e-70
 Identities = 144/329 (43%), Positives = 198/329 (60%), Gaps = 11/329 (3%)
 Frame = +3

Query: 3    STRDYYRRATLDFDGVLRQYTYPKTFQRNQ--SWPTSWS-----LPQDICAVVSGRYAQS 161
            ST+D+++RA L+ DGV RQY YPK    +   SWP +W+       + IC +++      
Sbjct: 249  STKDFHQRAILEHDGVFRQYVYPKKAAVSSAGSWPMTWTSLASIATEKICTIINAE--TG 306

Query: 162  SGVCGYNSYCKLNQDQRPVCECPPGYSYLDPQNPFEGCQPSFAPQSCMTNILAVAEGFEM 341
            SG CG+NSYC L  DQRP C+CPPGY++LDP +  +GC+ +F PQSC        E F+ 
Sbjct: 307  SGACGFNSYCILGDDQRPYCKCPPGYTFLDPHDEKKGCKQNFVPQSCNQESRETNE-FDF 365

Query: 342  QVIPSTDFTGDEYELFKSVDEDWCGATCLNNCFCATVRFSQGNCWLKKYPLSRGYMNPGS 521
            + + + D+   +YE FK V  DWC   CL++CFCA   F  G+CW KK PLS G  +P +
Sbjct: 366  ENMTNVDWPLADYEHFKEVTVDWCRNACLDDCFCAVAIFGDGDCWKKKNPLSNGRYDPSN 425

Query: 522  EGKTLIKVGKSSMEVMEQAPSPVFGGKNENKNHLILPGSIVLSCSGFLNILFLLLAI--- 692
                LIKVGK +       P    G K ++++ LI  GS++L  S FLN+L LL AI   
Sbjct: 426  GRLALIKVGKGNFTW----PPNWEGFKKKDRSTLITTGSVLLGSSVFLNLLLLLAAIMFI 481

Query: 693  -YGSSHKKRTKIPRDTRTFGTKLQSFTFKELEDATDGFKEALGKGASSTVYKGDLKSGSG 869
             Y +  K +   PR     G  L+SFT+ ELE ATDGFK  +G+GA +TVYKG L   +G
Sbjct: 482  FYLNDRKSKAVEPRPAME-GANLRSFTYSELEVATDGFKHEIGRGAFATVYKGTLAHDNG 540

Query: 870  SLVAVKRLDKVVLENDKEFKAEMSAIGKS 956
              VAVKRLD+ V+E ++EF+ E S IG++
Sbjct: 541  DFVAVKRLDRKVVEGEQEFETEASVIGRT 569


>ref|XP_002283186.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
            kinase RLK1 [Vitis vinifera]
          Length = 795

 Score =  269 bits (687), Expect = 8e-70
 Identities = 142/329 (43%), Positives = 196/329 (59%), Gaps = 11/329 (3%)
 Frame = +3

Query: 3    STRDYYRRATLDFDGVLRQYTYPKTFQRNQS-WPTSWS----LPQDICAVVSGRYAQSSG 167
            ST D+Y+RA L++DGV RQY YPK+   +   WP +WS    +P +IC  ++       G
Sbjct: 241  STEDFYQRAILEYDGVFRQYVYPKSAGSSSGRWPMAWSPSPSIPGNICMRITEN--TGGG 298

Query: 168  VCGYNSYCKLNQDQRPVCECPPGYSYLDPQNPFEGCQPSFAPQSCMTNILAVAEGFEMQV 347
             CG+NSYC L  DQRP C+CP GY +LD  +   GC+ +F  Q+C        + F  Q 
Sbjct: 299  ACGFNSYCILGDDQRPNCKCPTGYDFLDQSDKMSGCKQNFVTQNC-DQASRETDQFYFQE 357

Query: 348  IPSTDFTGDEYELFKSVDEDWCGATCLNNCFCATVRFSQGNCWLKKYPLSRGYMNPGSEG 527
            +P+TD+   +Y  F+ V EDWC   CL +CFCA   F  GNCW KK PLS G ++P   G
Sbjct: 358  MPNTDWPLSDYGYFQPVSEDWCREACLTDCFCAVAIFRDGNCWKKKIPLSNGRIDPSVGG 417

Query: 528  KTLIKVGKSSMEVMEQAPSPVFGGKNENKNH---LILPGSIVLSCSGFLNILFLL---LA 689
            K LIK+ + +            G  + NK H   LIL GS++L  S FLN LF L   L 
Sbjct: 418  KALIKLRQGNSTTKP-------GDGDSNKKHQSTLILTGSVLLGSSVFLNFLFFLATVLF 470

Query: 690  IYGSSHKKRTKIPRDTRTFGTKLQSFTFKELEDATDGFKEALGKGASSTVYKGDLKSGSG 869
            I+  +++K   +     T G  L+SFT+ EL++ATDGFKE LG+GA +TVYKG L    G
Sbjct: 471  IFRFNNRKTKMLHTYLSTLGMNLRSFTYNELDEATDGFKEELGRGAFATVYKGVLAYEKG 530

Query: 870  SLVAVKRLDKVVLENDKEFKAEMSAIGKS 956
             LVAVK+ +K++ EN++EF+ E+ AIG++
Sbjct: 531  KLVAVKKFEKMMRENEQEFQTEVKAIGQT 559


>emb|CAN59769.1| hypothetical protein VITISV_011720 [Vitis vinifera]
          Length = 767

 Score =  264 bits (674), Expect = 3e-68
 Identities = 144/330 (43%), Positives = 198/330 (60%), Gaps = 12/330 (3%)
 Frame = +3

Query: 3    STRDYYRRATLDFDGVLRQYTYPKTFQRNQ--SWPTSWS-----LPQDICAVVSGRYAQS 161
            ST+D+++RA L+ DGV RQY YPK    +   SWP +W+       + IC +++      
Sbjct: 249  STKDFHQRAILEHDGVFRQYVYPKKAAVSSAGSWPMTWTSLASIATEKICTIINAE--TG 306

Query: 162  SGVCGYNSYCKLNQDQRPVCECPPGYSYLDPQNPFEGCQPSFAPQSCMTNILAVAEGFEM 341
            SG CG+NSYC L  DQRP C+CPPGY++LDP +  +GC+ +F PQSC        E F+ 
Sbjct: 307  SGACGFNSYCILGDDQRPYCKCPPGYTFLDPHDEKKGCKQNFVPQSCNQESRETNE-FDF 365

Query: 342  QVIPSTDFTGDEYELFKSVDEDWCGATCLNNCFCATVRFSQGNCWLKKYPLSRGYMNPGS 521
            + + + D+   +YE FK V  DWC   CL++CFCA   F  G+CW KK PLS G  +P +
Sbjct: 366  ENMTNVDWPLADYEHFKEVTVDWCRNACLDDCFCAVAIFGDGDCWKKKNPLSNGRYDPSN 425

Query: 522  EGKTLIKVGKSSMEVMEQAPSPVFGGKNENKNHLILPGSIVLSCSGFLNILFLLLAI--- 692
                LIKVGK +       P    G K ++++ LI  GS++L  S FLN+L LL AI   
Sbjct: 426  GRLALIKVGKGNFTW----PPNWEGFKKKDRSTLITTGSVLLGSSVFLNLLLLLAAIMFI 481

Query: 693  -YGSSHKKRTKIPRDTRTFGTKLQSFTFKELEDATDGFKEALGKGASSTVYKGDLKSGSG 869
             Y +  K +   PR     G  L+SFT+ ELE ATDGFK  +G+GA +TVYKG L   +G
Sbjct: 482  FYLNDRKSKAVEPRPAME-GANLKSFTYSELEVATDGFKHEIGRGAFATVYKGTLAHDNG 540

Query: 870  SLVAVKRLDKVVLENDKEFKAEMSAI-GKS 956
              VAVKRLD+ V+E ++EF+ E + + GKS
Sbjct: 541  DFVAVKRLDRKVVEGEQEFETEATFLFGKS 570


>emb|CAN84023.1| hypothetical protein VITISV_004992 [Vitis vinifera]
          Length = 761

 Score =  262 bits (669), Expect = 1e-67
 Identities = 139/324 (42%), Positives = 192/324 (59%), Gaps = 11/324 (3%)
 Frame = +3

Query: 18   YRRATLDFDGVLRQYTYPKTFQRNQS-WPTSWS----LPQDICAVVSGRYAQSSGVCGYN 182
            ++RA L++DGV RQY YPK+   +   WP +WS    +P +IC  ++       G CG+N
Sbjct: 212  FQRAILEYDGVFRQYVYPKSAGSSSGRWPMAWSPSPSIPGNICMRITEN--TGGGACGFN 269

Query: 183  SYCKLNQDQRPVCECPPGYSYLDPQNPFEGCQPSFAPQSCMTNILAVAEGFEMQVIPSTD 362
            SYC L  DQRP C+CP GY +LD  +   GC+ +F  Q+C        + F  Q +P+TD
Sbjct: 270  SYCILGDDQRPNCKCPTGYDFLDQSDKMSGCKQNFVTQNC-DQASRETDQFYFQEMPNTD 328

Query: 363  FTGDEYELFKSVDEDWCGATCLNNCFCATVRFSQGNCWLKKYPLSRGYMNPGSEGKTLIK 542
            +   +Y  F+ V EDWC   CL +CFCA   F  GNCW KK PLS G ++P   GK LIK
Sbjct: 329  WPLSDYGYFQPVSEDWCREACLTDCFCAVAIFRDGNCWKKKIPLSNGRIDPSVGGKALIK 388

Query: 543  VGKSSMEVMEQAPSPVFGGKNENKNH---LILPGSIVLSCSGFLNILFLL---LAIYGSS 704
            + + +            G  + NK H   LIL GS++L  S FLN LF L   L I+  +
Sbjct: 389  LRQGNSTTKP-------GDGDSNKKHQSXLILTGSVLLGSSVFLNFLFFLATVLFIFRFN 441

Query: 705  HKKRTKIPRDTRTFGTKLQSFTFKELEDATDGFKEALGKGASSTVYKGDLKSGSGSLVAV 884
            ++K   +     T G  L+SFT+ EL++ATDGFKE LG+GA +TVYKG L    G LVAV
Sbjct: 442  NRKTKMLHTYLSTLGMNLRSFTYNELDEATDGFKEELGRGAFATVYKGVLAYEKGKLVAV 501

Query: 885  KRLDKVVLENDKEFKAEMSAIGKS 956
            K+ +K++ END+EF+ E+ AIG++
Sbjct: 502  KKFEKMMRENDQEFQTEVKAIGQT 525


>ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|222872794|gb|EEF09925.1|
            predicted protein [Populus trichocarpa]
          Length = 801

 Score =  257 bits (656), Expect = 3e-66
 Identities = 134/323 (41%), Positives = 199/323 (61%), Gaps = 5/323 (1%)
 Frame = +3

Query: 3    STRDYYRRATLDFDGVLRQYTYPKTFQRNQSWPTSWSLPQDICAVVSGRYAQSSGVCGYN 182
            ST D+YRRATL+FDG+  QY +PK    N+ W   WS P +IC   +   +  SG CG+N
Sbjct: 250  STGDFYRRATLNFDGLFTQYYHPKASTGNERWTPIWSQPDNICQ--ASFVSSGSGTCGFN 307

Query: 183  SYCKLNQDQRPVCECPPGYSYLDPQNPFEGCQPSFAPQSCMTNILAVAEG-FEMQVIPST 359
            S C+LN D+RP+CECP GYS LDP + +  C+P++  QSC  + +A  E  ++ + + +T
Sbjct: 308  SVCRLNSDRRPICECPGGYSLLDPSDQYGSCRPNYT-QSCEEDEVAPVEDLYDFEELTNT 366

Query: 360  DFTGDEYELFKSVDEDWCGATCLNNCFCATVRFSQGN-CWLKKYPLSRGYMNPGSEGKTL 536
            D+   +Y L K   E+ C  +CLN+C CA   F  G+ CW KK PLS G +    +GK L
Sbjct: 367  DWPTSDYALLKPFTEEKCRQSCLNDCMCAVAIFRSGDMCWKKKLPLSNGRVQTNLDGKAL 426

Query: 537  IKVGKSSMEVMEQAPSPVFGGKNENKNHLILPGSIVLSCSGFLNILFL--LLAIYGSSHK 710
            +KV +S++       SP F    ++++ LIL GS+ L CS F+N L +  +   +   ++
Sbjct: 427  LKVRRSNV----NPRSPYFPNNKKDRDGLILVGSVFLGCSVFVNFLLVCAIFMCFFFIYR 482

Query: 711  KRTK-IPRDTRTFGTKLQSFTFKELEDATDGFKEALGKGASSTVYKGDLKSGSGSLVAVK 887
            +RTK IP+      T L+ FT++EL +AT+GFKE LG+GA   VYKG +  GS  +VAVK
Sbjct: 483  RRTKRIPQKDGAVETNLRCFTYQELAEATEGFKEELGRGAFGVVYKGVVHIGSSIVVAVK 542

Query: 888  RLDKVVLENDKEFKAEMSAIGKS 956
            +L+ V  +  +EFK E++ IG++
Sbjct: 543  KLNNVAEDRVREFKTEVNVIGQT 565


Top