BLASTX nr result

ID: Coptis25_contig00033776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033776
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267...   100   1e-19
ref|XP_003632599.1| PREDICTED: DELLA protein RGA2-like [Vitis vi...   100   2e-19
emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera]    99   3e-19
ref|XP_003552270.1| PREDICTED: nodulation-signaling pathway 2 pr...    97   1e-18
ref|XP_002323604.1| GRAS family transcription factor [Populus tr...    97   2e-18

>ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267833 [Vitis vinifera]
          Length = 1435

 Score =  100 bits (250), Expect = 1e-19
 Identities = 49/86 (56%), Positives = 63/86 (73%)
 Frame = +2

Query: 2   LPKEDMEMDNQLIIPPLLKAYGEAIENGQAELAEVILRCVKEKVGPMGSTVERFACYLFQ 181
           LP ED+EMDN+L I  L+ AYGEA+E G+AELA V++  ++EKV P G  VER + YLFQ
Sbjct: 286 LPTEDVEMDNELSIVHLVMAYGEAVEKGEAELAVVLMNRIQEKVSPAGEVVERLSYYLFQ 345

Query: 182 ALDKQGEYLKEESNKIYGEAFRAFYQ 259
             DKQ  YL++ES K +  AF+AFYQ
Sbjct: 346 PTDKQTNYLRQESAKNFNVAFKAFYQ 371


>ref|XP_003632599.1| PREDICTED: DELLA protein RGA2-like [Vitis vinifera]
          Length = 490

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 49/86 (56%), Positives = 62/86 (72%)
 Frame = +2

Query: 2   LPKEDMEMDNQLIIPPLLKAYGEAIENGQAELAEVILRCVKEKVGPMGSTVERFACYLFQ 181
           LP ED+EMDNQL I  L+ AYGEA+E G+AELA V++  ++EKV P G  VER + YLFQ
Sbjct: 151 LPTEDVEMDNQLSIVHLVMAYGEAVEKGEAELAVVLMNRIQEKVSPAGEVVERLSYYLFQ 210

Query: 182 ALDKQGEYLKEESNKIYGEAFRAFYQ 259
             DKQ  YL++E  K +  AF+AFYQ
Sbjct: 211 PTDKQTNYLRQEFAKNFNVAFKAFYQ 236


>emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera]
          Length = 535

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/86 (56%), Positives = 62/86 (72%)
 Frame = +2

Query: 2   LPKEDMEMDNQLIIPPLLKAYGEAIENGQAELAEVILRCVKEKVGPMGSTVERFACYLFQ 181
           LP ED+EMDNQL I  L+ AYGEA+E G+AELA V++  ++EKV P G  VER + YLFQ
Sbjct: 151 LPTEDVEMDNQLSIVHLVMAYGEAVEKGEAELAVVLMNRIQEKVSPAGEVVERLSYYLFQ 210

Query: 182 ALDKQGEYLKEESNKIYGEAFRAFYQ 259
             DKQ  YL++ES K +  AF+A YQ
Sbjct: 211 PTDKQTNYLRQESAKNFNVAFKAXYQ 236


>ref|XP_003552270.1| PREDICTED: nodulation-signaling pathway 2 protein-like [Glycine
           max]
          Length = 497

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/86 (53%), Positives = 61/86 (70%)
 Frame = +2

Query: 2   LPKEDMEMDNQLIIPPLLKAYGEAIENGQAELAEVILRCVKEKVGPMGSTVERFACYLFQ 181
           LP E+ME++NQ+ +P LLKAYGEA+E GQ  L EVILRC+ +K  P+G ++ER A YL Q
Sbjct: 117 LPLENMEVENQVSLPHLLKAYGEALEQGQKALEEVILRCISQKASPLGESLERLAFYLSQ 176

Query: 182 ALDKQGEYLKEESNKIYGEAFRAFYQ 259
            +   G+YLK E+ K +  A RA YQ
Sbjct: 177 GMTNHGDYLKGEALKNFEAALRALYQ 202


>ref|XP_002323604.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222868234|gb|EEF05365.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 535

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/86 (54%), Positives = 64/86 (74%)
 Frame = +2

Query: 2   LPKEDMEMDNQLIIPPLLKAYGEAIENGQAELAEVILRCVKEKVGPMGSTVERFACYLFQ 181
           LP E+++++NQ+ +  LLKAYGEA++ GQ+ELA+VI+RCV EKV P G   E  A  L Q
Sbjct: 149 LPGEELQLENQVSLFHLLKAYGEAMDGGQSELADVIMRCVSEKVSPAGEAFECLAFNLCQ 208

Query: 182 ALDKQGEYLKEESNKIYGEAFRAFYQ 259
            L+KQG+Y+K ES + +  AFRAFYQ
Sbjct: 209 DLEKQGDYIKRESCRNFEAAFRAFYQ 234


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