BLASTX nr result

ID: Coptis25_contig00033774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033774
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM63025.1| unknown [Arabidopsis thaliana]                          57   2e-06
ref|NP_198883.1| cystinosin [Arabidopsis thaliana] gi|13124057|s...    56   3e-06

>gb|AAM63025.1| unknown [Arabidopsis thaliana]
          Length = 270

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/50 (54%), Positives = 32/50 (64%)
 Frame = -1

Query: 299 NIS*TDLLQVSIFFDLLFIVQHYFLYPSKKEKVSPEADEESTAPLVKFPH 150
           N+  T L  +SIFFD+LF+ QHY LYP KK   SPE  EES  PL+   H
Sbjct: 218 NMGKTLLSLISIFFDILFMCQHYVLYPEKKVSKSPETSEESNEPLIDSSH 267


>ref|NP_198883.1| cystinosin [Arabidopsis thaliana]
           gi|13124057|sp|P57758.1|CTNS_ARATH RecName:
           Full=Cystinosin homolog gi|9758095|dbj|BAB08539.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|15529266|gb|AAK97727.1| AT5g40670/MNF13_190
           [Arabidopsis thaliana] gi|16974419|gb|AAL31135.1|
           AT5g40670/MNF13_190 [Arabidopsis thaliana]
           gi|332007197|gb|AED94580.1| cystinosin [Arabidopsis
           thaliana]
          Length = 270

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/50 (54%), Positives = 32/50 (64%)
 Frame = -1

Query: 299 NIS*TDLLQVSIFFDLLFIVQHYFLYPSKKEKVSPEADEESTAPLVKFPH 150
           N+  T L  +SIFFD+LF+ QHY LYP KK   SPE  EES  PL+   H
Sbjct: 218 NMGKTLLSLISIFFDILFMFQHYVLYPEKKVSKSPETGEESNEPLIDSSH 267


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