BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033771
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   112   2e-23
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               111   7e-23
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               107   1e-21
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   104   6e-21

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/137 (40%), Positives = 84/137 (61%), Gaps = 1/137 (0%)
 Frame = +1

Query: 4   YAGTFYGMGQIVHFLIHSLEVNRICRNFLWNGTDCSFSHSLIGWEQICYPYDEGGLEISD 183
           +A  F   GQ++        V +I ++FLW+G+D   + + + W+Q+C P  EGGL I  
Sbjct: 112 WASLFLLPGQVIK------NVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKS 165

Query: 184 LARVNQAATMKHLWHIVSDKD-SLWVKWVKKNLIRGRNFWHIKIPSDCSWVWRNILKLRK 360
           +   N+ A +KH+W++ +D D S+W  W++ NL+RGRNFW IK P +CSW W  ILKLR 
Sbjct: 166 IKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRS 225

Query: 361 DASFFAMHLIGEGKETS 411
            A     ++IG+G  TS
Sbjct: 226 LAWPKMKYIIGDGMTTS 242


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  112 bits (281), Expect = 2e-23
 Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
 Frame = +1

Query: 61   EVNRICRNFLWNGTDCSFSHSLIGWEQICYPYDEGGLEISDLARVNQAATMKHLWHIVSD 240
            E+ ++C  FLW+GT+ + + + I W  +C P DEGGL +  L   N    +K +W IVS 
Sbjct: 838  ELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSH 897

Query: 241  KDSLWVKWVKKNLIRGRNFWHIK-IPSDCSWVWRNILKLRKDASFFAMHLIGEGKETSF 414
             +SLWVKWV ++L+R  +FW +K   S  SW+W+ +LK R+ A   +   +G GK+TSF
Sbjct: 898  SNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSF 956


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
 Frame = +1

Query: 61  EVNRICRNFLWNGTDCSFSHSLIGWEQICYPYDEGGLEISDLARVNQAATMKHLWHIVSD 240
           E+ ++C +FLW+GT+ +   + I W Q+C P  EGGL +  L   N    +K +W I+S 
Sbjct: 391 EIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISH 450

Query: 241 KDSLWVKWVKKNLIRGRNFWHIKIPSDC-SWVWRNILKLRKDASFFAMHLIGEGKETSF 414
            DSLWVKWV+ NL++   FW +K  ++  SW+W+ ILK R  A  F    +G G+ TSF
Sbjct: 451 GDSLWVKWVEHNLLKREIFWIVKENANLGSWIWKKILKYRGVAKRFCKAEVGNGESTSF 509


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  107 bits (267), Expect = 1e-21
 Identities = 46/119 (38%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
 Frame = +1

Query: 61  EVNRICRNFLWNGTDCSFSHSLIGWEQICYPYDEGGLEISDLARVNQAATMKHLWHIVSD 240
           E++++C +FLW+G++ S   + I W+ +C P  EGGL + +L   N  + +K +W I+S+
Sbjct: 485 EIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISN 544

Query: 241 KDSLWVKWVKKNLIRGRNFWHIKIPSDC-SWVWRNILKLRKDASFFAMHLIGEGKETSF 414
            +SLW KWV + LIR ++ W +K  +   SW+WR ILK+R  A  F+   +G G+  SF
Sbjct: 545 SNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASF 603


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score =  104 bits (260), Expect = 6e-21
 Identities = 44/118 (37%), Positives = 68/118 (57%)
 Frame = +1

Query: 61  EVNRICRNFLWNGTDCSFSHSLIGWEQICYPYDEGGLEISDLARVNQAATMKHLWHIVSD 240
           E++++C  FLW+G + S + + I WE +C P  EGGL +  +   N    +K +W IVS 
Sbjct: 356 EIDKLCSAFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQ 415

Query: 241 KDSLWVKWVKKNLIRGRNFWHIKIPSDCSWVWRNILKLRKDASFFAMHLIGEGKETSF 414
            DSLWV+W++  L++   FW  +  S  SW+W+ +LK R  A  F+   I  G+  SF
Sbjct: 416 GDSLWVQWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDIRNGETASF 473