BLASTX nr result
ID: Coptis25_contig00033770
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00033770
(501 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera] 40 5e-08
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera] 40 1e-07
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera] 37 2e-07
ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256... 37 2e-07
emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera] 37 2e-07
>emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 39.7 bits (91), Expect(4) = 5e-08
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = -1
Query: 237 VCISHLKFVDDILIFLGAEVGQVRWLRGICCCFVVASWLEVYLSKSKMSGIG 82
V +SHL F DD L+F + Q+ + + + CF V S L++ L KS++ IG
Sbjct: 1487 VLVSHLLFADDTLLFCEDDRDQLIFWKWVVICFEVVSGLKINLQKSEIIPIG 1538
Score = 29.3 bits (64), Expect(4) = 5e-08
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -2
Query: 332 PILFILV-EVLEIMISRTNPRGVLEGFR-VGDAGSAFLTSSLL 210
P LF+L+ E L +ISR G + GF+ G G L S LL
Sbjct: 1451 PYLFVLIMEGLSSLISRAEENGFIRGFKATGRRGEGVLVSHLL 1493
Score = 27.7 bits (60), Expect(4) = 5e-08
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 403 VIVNESLAKFFKNLRGIRQGNP 338
V+VN + FF RG+RQG+P
Sbjct: 1427 VLVNGTPTDFFSTFRGLRQGDP 1448
Score = 23.1 bits (48), Expect(4) = 5e-08
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 501 DHVSWRFLDYVL 466
DHV+WRFL VL
Sbjct: 1392 DHVNWRFLMSVL 1403
>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
Length = 1201
Score = 39.7 bits (91), Expect(4) = 1e-07
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = -1
Query: 237 VCISHLKFVDDILIFLGAEVGQVRWLRGICCCFVVASWLEVYLSKSKMSGIG 82
V +SHL F DD L+F + Q+ + + + CF V S L++ L KS++ IG
Sbjct: 665 VSVSHLLFADDTLLFCEDDRDQLIFWKWVVICFEVVSGLKINLQKSEIIPIG 716
Score = 28.1 bits (61), Expect(4) = 1e-07
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 332 PILFILV-EVLEIMISRTNPRGVLEGFR-VGDAGSAFLTSSLL 210
P LF+L+ E L +ISR G + GF+ G G S LL
Sbjct: 629 PYLFVLIMEALSSLISRAEENGFIRGFKATGRRGEGVSVSHLL 671
Score = 27.7 bits (60), Expect(4) = 1e-07
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 403 VIVNESLAKFFKNLRGIRQGNP 338
V+VN + FF RG+RQG+P
Sbjct: 605 VLVNGTPTDFFSTFRGLRQGDP 626
Score = 23.1 bits (48), Expect(4) = 1e-07
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 501 DHVSWRFLDYVL 466
DHV+WRFL VL
Sbjct: 570 DHVNWRFLMSVL 581
>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
Length = 4128
Score = 36.6 bits (83), Expect(4) = 2e-07
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = -1
Query: 231 ISHLKFVDDILIFLGAEVGQVRWLRGICCCFVVASWLEVYLSKSKMSGIG 82
+SHL F DD LIF A+ Q+++L F S L+V L+K++ +G
Sbjct: 3087 VSHLLFADDTLIFCDADADQLQYLSWTFMWFEAISGLKVNLNKTEAIPVG 3136
Score = 30.4 bits (67), Expect(4) = 2e-07
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 332 PILFIL-VEVLEIMISRTNPRGVLEGFRVGDAGSAFLTSSLLM 207
P LF+L +E L ++SR + GFRVG GS L S L+
Sbjct: 3049 PYLFLLAMEALSQLLSRARNGNFISGFRVGGRGSEGLVVSHLL 3091
Score = 30.0 bits (66), Expect(4) = 2e-07
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -3
Query: 409 FLVIVNESLAKFFKNLRGIRQGNP 338
F +++N S + FF++ RG+RQG+P
Sbjct: 3023 FSILINGSPSGFFRSSRGLRQGDP 3046
Score = 20.4 bits (41), Expect(4) = 2e-07
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 501 DHVSWRFLDYVL 466
DHV+W FL V+
Sbjct: 2990 DHVNWNFLMEVM 3001
>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
Length = 2667
Score = 36.6 bits (83), Expect(4) = 2e-07
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = -1
Query: 231 ISHLKFVDDILIFLGAEVGQVRWLRGICCCFVVASWLEVYLSKSKMSGIG 82
+SHL F DD LIF A+ Q+++L F S L+V L+K++ +G
Sbjct: 686 VSHLLFADDTLIFCDADADQLQYLSWTFMWFEAISGLKVNLNKTEAIPVG 735
Score = 30.4 bits (67), Expect(4) = 2e-07
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 332 PILFIL-VEVLEIMISRTNPRGVLEGFRVGDAGSAFLTSSLLM 207
P LF+L +E L ++SR + GFRVG GS L S L+
Sbjct: 648 PYLFLLAMEALSQLLSRARNGNFISGFRVGGRGSEGLVVSHLL 690
Score = 30.0 bits (66), Expect(4) = 2e-07
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -3
Query: 409 FLVIVNESLAKFFKNLRGIRQGNP 338
F +++N S + FF++ RG+RQG+P
Sbjct: 622 FSILINGSPSGFFRSSRGLRQGDP 645
Score = 20.4 bits (41), Expect(4) = 2e-07
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 501 DHVSWRFLDYVL 466
DHV+W FL V+
Sbjct: 589 DHVNWNFLMEVM 600
>emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]
Length = 1728
Score = 36.6 bits (83), Expect(4) = 2e-07
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = -1
Query: 231 ISHLKFVDDILIFLGAEVGQVRWLRGICCCFVVASWLEVYLSKSKMSGIG 82
+SHL F DD LIF A+ Q+++L F S L+V L+K++ +G
Sbjct: 767 VSHLLFADDTLIFCDADADQLQYLSWTFMWFEAISGLKVNLNKTEAIPVG 816
Score = 30.4 bits (67), Expect(4) = 2e-07
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 332 PILFIL-VEVLEIMISRTNPRGVLEGFRVGDAGSAFLTSSLLM 207
P LF+L +E L ++SR + GFRVG GS L S L+
Sbjct: 729 PYLFLLAMEALSQLLSRARNGNFISGFRVGGRGSEGLVVSHLL 771
Score = 30.0 bits (66), Expect(4) = 2e-07
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -3
Query: 409 FLVIVNESLAKFFKNLRGIRQGNP 338
F +++N S + FF++ RG+RQG+P
Sbjct: 703 FSILINGSPSGFFRSSRGLRQGDP 726
Score = 20.4 bits (41), Expect(4) = 2e-07
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 501 DHVSWRFLDYVL 466
DHV+W FL V+
Sbjct: 670 DHVNWNFLMEVM 681