BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033767
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    55   5e-09
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    40   7e-07
ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis...    49   1e-06
ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    41   2e-06
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    57   3e-06

>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 54.7 bits (130), Expect(2) = 5e-09
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
 Frame = +2

Query: 14  TGLWKATLDPLSSYIDSVKT--ALVNGSRHWLACNPFD-RMQKFIVSFDIKDEVFQEISL 184
           T +WK TL  +   +   +T    V+G+ HW+     +   +  IV+FD++ EVF+E++L
Sbjct: 181 TDVWK-TLPSMPYALCCARTMGVFVSGALHWVVTRDLEPESRDLIVAFDLRFEVFREVAL 239

Query: 185 PNCLDYDCDTKIRQLGGLLCIFLYCYEDVVEVWVMK 292
           P  +D   D  +  L G+LCI      D  +VWVM+
Sbjct: 240 PGTVDGKFDMDVALLRGMLCIIENRGSDGFDVWVMR 275



 Score = 31.2 bits (69), Expect(2) = 5e-09
 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +1

Query: 409 SWTKLFKVGRPDIGGHIFLLEPLGVANSGD-IVIKKNELELVVYN 540
           SW K+F VG+P     +  L+PLG + +GD ++ +++  +L  YN
Sbjct: 282 SWCKMFTVGQPRDVKLMKSLKPLGYSRNGDKVLFEQDSKKLCWYN 326


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 39.7 bits (91), Expect(2) = 7e-07
 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
 Frame = +2

Query: 23  WKATLD-PLSSYIDSVKTALVNGSRHWLAC-NPFDRMQKFIVSFDIKDEVFQEISLPNCL 196
           W+   D P   +         NG+ HW+   NP   +   +V+ D+  E ++E+  P   
Sbjct: 190 WRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYREVLQPEYK 249

Query: 197 DYDCDTKIRQLGGLLCIFLYCYEDVVEVWVMK 292
           D +    +  L G LC       + V+VW+MK
Sbjct: 250 DKNFYIDLGVLRGCLCFLANFLGERVDVWMMK 281



 Score = 38.9 bits (89), Expect(2) = 7e-07
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = +1

Query: 409 SWTKLFKVGRPDIGGHIFLLEPLGVANSGD-IVIKKNELELVVYNPKTNSIR 561
           SWTKLF V + ++ G +  L+PL  + SGD ++I+ + L+L  Y+ K   ++
Sbjct: 288 SWTKLFSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVK 339


>ref|XP_004139617.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449508988|ref|XP_004163461.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 179

 Score = 49.3 bits (116), Expect(2) = 1e-06
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = +2

Query: 80  VNGSRHWLACNPFDR-MQKFIVSFDIKDEVFQEISLPNCLDYDCDTKIRQLGGLLCIFLY 256
           VN + HW+        +   +V+FD+    F+EI LP   D+ C+  +  LGG LC+   
Sbjct: 5   VNNALHWVVSENLGMGLADLVVAFDLGTGRFEEIPLPELTDFKCEIHVDVLGGCLCLIAN 64

Query: 257 CYEDVVEVWVMK 292
                 EVWVMK
Sbjct: 65  YDRVRFEVWVMK 76



 Score = 28.5 bits (62), Expect(2) = 1e-06
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +1

Query: 409 SWTKLFKVGRPDIGGHIFLLEPLGVANSG-DIVIKKNELELVVYNPKTNSI 558
           SW KL  V + D  G I  ++PL  + +G  +++  N  +L+ Y+  T ++
Sbjct: 83  SWMKLLTVSQVDFVGSIKSVKPLTYSKTGCKVLLLHNRRKLIWYDLDTQTV 133


>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 41.2 bits (95), Expect(2) = 2e-06
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
 Frame = +2

Query: 74  ALVNGSRHWLACNPFDRMQKFIVSFDIKDEVFQEISLP-----NCLDYDCDTKIRQLGGL 238
           A V G  HW+  +P     +FI   +   E+FQ ++ P     N  D   D  +  LGG 
Sbjct: 230 AFVGGCLHWIVNDP--SKSEFIYCLEFGRELFQPVAAPPHLGPNDKDRTGDMMLGVLGGC 287

Query: 239 LCIFLYCYEDVVEVWVMK 292
           L  F Y   D  ++WVMK
Sbjct: 288 LYFFDYPLGDSFDIWVMK 305



 Score = 35.4 bits (80), Expect(2) = 2e-06
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +1

Query: 409 SWTKLFKVGRP--DIGGHIFLLEPLGVANSGDIVIKKNELELVVYNPKTNSIRTLETF 576
           SWTK F +  P  DI  +  L  P+ + ++G+I++      +V YNP+  S R L+ +
Sbjct: 312 SWTKEFILKNPSTDIIWYWDLYRPISLLSNGEILMSHKSKAMVSYNPEDRSFRFLKIY 369


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +2

Query: 77  LVNGSRHWLACNPFDRMQKFIVSFDIKDEVFQEISLPNCLDYD-CDTKIRQLGGLLCIFL 253
           LVNG  HW++    ++  + +VSFD+ DE F+E+  P+C   + CD  +  L G L + +
Sbjct: 235 LVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLSVAV 294

Query: 254 YCYEDVVEVWVMK 292
           YC    +E+WVMK
Sbjct: 295 YCNYGRLEIWVMK 307