BLASTX nr result

ID: Coptis25_contig00033757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033757
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281699.1| PREDICTED: uncharacterized protein LOC100262...   187   8e-46
ref|XP_003528282.1| PREDICTED: uncharacterized protein LOC100815...   168   5e-40
ref|XP_003524000.1| PREDICTED: uncharacterized protein LOC100805...   167   9e-40
emb|CBI28139.3| unnamed protein product [Vitis vinifera]              149   4e-34
ref|XP_002529355.1| conserved hypothetical protein [Ricinus comm...   149   4e-34

>ref|XP_002281699.1| PREDICTED: uncharacterized protein LOC100262914 [Vitis vinifera]
          Length = 395

 Score =  187 bits (476), Expect = 8e-46
 Identities = 106/182 (58%), Positives = 136/182 (74%), Gaps = 10/182 (5%)
 Frame = -2

Query: 571 TVKKIPPSPLGPRGTSSWRRSGLKLIAGPPPGSDQFTFLFAELLYENRPVLFQYSSGNDT 392
           TVKKIPPSPLGPRGTSSWRRSG+KL+AG PPGSD F FLFAEL+ ENRP++F+Y+S +D 
Sbjct: 134 TVKKIPPSPLGPRGTSSWRRSGMKLVAG-PPGSDSFRFLFAELV-ENRPIMFEYNSDDDK 191

Query: 391 WRSVEAVENDGYLP-----TRGKVFLSVVHRSSDSILLAIES-NIETPVILRPRFNEGAI 230
           W+S+EA EN G LP         +FLSVV+ +++S++LAI S    TPV+LRPRF+ GAI
Sbjct: 192 WQSMEAEENHGDLPRVFEGAGPLIFLSVVNGTNESVVLAIGSQGNNTPVVLRPRFSGGAI 251

Query: 229 DGR-LAIGFS---TIGRLHVYGDGCMVIVKSEGMNMIDENDRVRVFTCIEVWGLCVDGRG 62
           + R +A+GFS    I RL VYGDG M+IV+S+ ++  D N + RV   IE+WGL  +GR 
Sbjct: 252 EQRQVAVGFSWGNGINRLQVYGDGYMMIVRSDDVD--DGNTKERVLKEIEMWGLSPNGRR 309

Query: 61  WE 56
           WE
Sbjct: 310 WE 311


>ref|XP_003528282.1| PREDICTED: uncharacterized protein LOC100815083 [Glycine max]
          Length = 397

 Score =  168 bits (426), Expect = 5e-40
 Identities = 97/184 (52%), Positives = 118/184 (64%), Gaps = 12/184 (6%)
 Frame = -2

Query: 571 TVKKIPPSPLGPRGTSSWRRSGLKLIAGPPPGSDQFTFLFAELLYENRPVLFQYSSGNDT 392
           TVKKIPPSPLGPRGTSSWRRSG+KL+   P GS  F F+FAE + +NRPVLF Y S  DT
Sbjct: 140 TVKKIPPSPLGPRGTSSWRRSGMKLVT-DPTGSGHFRFMFAEFV-DNRPVLFVYESRTDT 197

Query: 391 WRSVEAVEND-------GYLPT-RGKVFLSVVHRSSDSILLA-IESNIETPVILRPRFNE 239
           WRS EA EN         + P   G VFL+VVH   +S+L+A +    +  V+LRPRFN 
Sbjct: 198 WRSTEAEENTNTNEFSFSFSPRGAGHVFLNVVHGPMESVLVATMPDECDKSVVLRPRFNV 257

Query: 238 GAIDGRLAIGFS---TIGRLHVYGDGCMVIVKSEGMNMIDENDRVRVFTCIEVWGLCVDG 68
              +  L +GFS    +  LHVYGDG M++VKSEG N       VRV   +E+WGL +DG
Sbjct: 258 AGANDDLTVGFSWGNVMDMLHVYGDGYMMVVKSEGGN----TRNVRVLKRVELWGLSLDG 313

Query: 67  RGWE 56
           R WE
Sbjct: 314 RKWE 317


>ref|XP_003524000.1| PREDICTED: uncharacterized protein LOC100805433 [Glycine max]
          Length = 395

 Score =  167 bits (424), Expect = 9e-40
 Identities = 96/182 (52%), Positives = 118/182 (64%), Gaps = 10/182 (5%)
 Frame = -2

Query: 571 TVKKIPPSPLGPRGTSSWRRSGLKLIAGPPPGSDQFTFLFAELLYENRPVLFQYSSGNDT 392
           TVKKIPPSPLGPRGTSSWRRSG+KL+     GS QF F+FAE + +NRPVLF Y S  DT
Sbjct: 140 TVKKIPPSPLGPRGTSSWRRSGMKLVT-DSSGSGQFRFMFAEFV-DNRPVLFAYESETDT 197

Query: 391 WRSVEAVENDG-----YLPTRG--KVFLSVVHRSSDSILLAIESNIETPVILRPRFNEGA 233
           W+S EA E++          RG   VFL+VVH   +S+L+A     + PV+LRPRFN   
Sbjct: 198 WKSTEAEEDNNKEFSFSFSPRGASHVFLNVVHGPMESVLVAATPECDKPVVLRPRFNVTE 257

Query: 232 IDGRLAIGFS---TIGRLHVYGDGCMVIVKSEGMNMIDENDRVRVFTCIEVWGLCVDGRG 62
            +  L +GFS    +  LHVYGDG M+IVKSEG N       VRV   +E+WGL ++GR 
Sbjct: 258 ANDDLTVGFSWGNVMDMLHVYGDGYMMIVKSEGGN----TRNVRVLKGVELWGLSLNGRK 313

Query: 61  WE 56
           WE
Sbjct: 314 WE 315


>emb|CBI28139.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  149 bits (375), Expect = 4e-34
 Identities = 88/178 (49%), Positives = 110/178 (61%), Gaps = 6/178 (3%)
 Frame = -2

Query: 571 TVKKIPPSPLGPRGTSSWRRSGLKLIAGPPPGSDQFTFLFAELLYENRPVLFQYSSGNDT 392
           TVKKIPPSPLGPRGTSSWRRSG+KL+AG PPGSD F FLFAEL+ ENRP++F+Y+S +D 
Sbjct: 161 TVKKIPPSPLGPRGTSSWRRSGMKLVAG-PPGSDSFRFLFAELV-ENRPIMFEYNSDDDK 218

Query: 391 WRSVEAVENDGYLP-----TRGKVFLSVVHRSSDSILLAIES-NIETPVILRPRFNEGAI 230
           W+S+EA EN G LP         +FLSVV+ +++S++LAI S    TPV+LRPRF+ GAI
Sbjct: 219 WQSMEAEENHGDLPRVFEGAGPLIFLSVVNGTNESVVLAIGSQGNNTPVVLRPRFSGGAI 278

Query: 229 DGRLAIGFSTIGRLHVYGDGCMVIVKSEGMNMIDENDRVRVFTCIEVWGLCVDGRGWE 56
           + R                                    RV   IE+WGL  +GR WE
Sbjct: 279 EQRQV---------------------------------ARVLKEIEMWGLSPNGRRWE 303


>ref|XP_002529355.1| conserved hypothetical protein [Ricinus communis]
           gi|223531175|gb|EEF33022.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score =  149 bits (375), Expect = 4e-34
 Identities = 91/183 (49%), Positives = 119/183 (65%), Gaps = 11/183 (6%)
 Frame = -2

Query: 571 TVKKIPPSPLGPRGTSSWRRSGLKLIAGPPPGSDQFTFLFAELLYENRPVLFQYSSGNDT 392
           TVKKIPPSPLGPRGTSSWRRSG+KL++     S+ F FLFAEL+ E RPVLF Y+S  DT
Sbjct: 138 TVKKIPPSPLGPRGTSSWRRSGMKLVS----RSNSFRFLFAELV-ETRPVLFVYASETDT 192

Query: 391 WRSVEAVENDGYLPTRGK------VFLSVVHRSSDSILLAIE-SNIETPVILRPRFNEGA 233
           WRS+E  E+   LP RG       ++L+VV+   +S+++AI   + + P+++R RF    
Sbjct: 193 WRSMEGKEHVDKLP-RGSQRVGDYIYLNVVNGPYESVVMAIALESPDEPLVVRLRFGGER 251

Query: 232 IDG-RLAIGFS---TIGRLHVYGDGCMVIVKSEGMNMIDENDRVRVFTCIEVWGLCVDGR 65
            DG RL +GFS      RL+VYGDG M+++KS G+   D     RV   IE+WGL   GR
Sbjct: 252 DDGERLTVGFSWGNVTDRLYVYGDGYMLVIKSNGVG--DAETGARVLNDIELWGLGSSGR 309

Query: 64  GWE 56
            WE
Sbjct: 310 RWE 312


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