BLASTX nr result

ID: Coptis25_contig00033755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033755
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40590.1| unknown [Lotus japonicus]                              225   3e-57
ref|XP_002878331.1| immunophilin [Arabidopsis lyrata subsp. lyra...   221   5e-56
ref|NP_001236089.1| uncharacterized protein LOC100305486 [Glycin...   221   5e-56
ref|XP_002327057.1| predicted protein [Populus trichocarpa] gi|2...   221   5e-56
ref|NP_567098.2| FKBP-type peptidyl-prolyl cis-trans isomerase 6...   220   1e-55

>gb|AFK40590.1| unknown [Lotus japonicus]
          Length = 246

 Score =  225 bits (574), Expect = 3e-57
 Identities = 103/117 (88%), Positives = 112/117 (95%)
 Frame = +1

Query: 4   DIEAGQGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGAPAKIRMGTNSLVPGFEEGIRDM 183
           D E G+GDCPKDGQQVTFHY GYNESGRRIDSTYLQG+PAKIRMGT +LVPGFEEGI+DM
Sbjct: 130 DFEVGKGDCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKIRMGTKALVPGFEEGIKDM 189

Query: 184 KPGGKRRVIIPPELGPPVGPSTFFSSKQFEVFDVELLNIQNCERRTILAFYSDVVCS 354
           +PGGKRR+IIPPELGPPVGPSTFFS+KQFEVFDVELL IQNCERRT+LAFYSDVVC+
Sbjct: 190 RPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLGIQNCERRTVLAFYSDVVCN 246


>ref|XP_002878331.1| immunophilin [Arabidopsis lyrata subsp. lyrata]
           gi|297324169|gb|EFH54590.1| immunophilin [Arabidopsis
           lyrata subsp. lyrata]
          Length = 244

 Score =  221 bits (563), Expect = 5e-56
 Identities = 101/117 (86%), Positives = 111/117 (94%)
 Frame = +1

Query: 4   DIEAGQGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGAPAKIRMGTNSLVPGFEEGIRDM 183
           D + GQGD PKDGQQVTFHY+GYNESGRRIDSTY+QG+PA+IRMGTN+LVPGFE GIRDM
Sbjct: 128 DFDVGQGDSPKDGQQVTFHYIGYNESGRRIDSTYIQGSPARIRMGTNALVPGFEMGIRDM 187

Query: 184 KPGGKRRVIIPPELGPPVGPSTFFSSKQFEVFDVELLNIQNCERRTILAFYSDVVCS 354
           KPGG+RR+IIPPELGPPVGPSTFFSSKQFEVFDVELL+IQNCERRTI+ FYSDV CS
Sbjct: 188 KPGGRRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIIGFYSDVTCS 244


>ref|NP_001236089.1| uncharacterized protein LOC100305486 [Glycine max]
           gi|255625657|gb|ACU13173.1| unknown [Glycine max]
          Length = 248

 Score =  221 bits (563), Expect = 5e-56
 Identities = 104/117 (88%), Positives = 110/117 (94%)
 Frame = +1

Query: 4   DIEAGQGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGAPAKIRMGTNSLVPGFEEGIRDM 183
           D   GQGDCPKDGQQVTFHY+GYNESGRRIDSTYLQG PAKIRMGT  LVPGFEEGIRDM
Sbjct: 133 DFVVGQGDCPKDGQQVTFHYIGYNESGRRIDSTYLQGTPAKIRMGTKGLVPGFEEGIRDM 192

Query: 184 KPGGKRRVIIPPELGPPVGPSTFFSSKQFEVFDVELLNIQNCERRTILAFYSDVVCS 354
           +PGGKRR+IIPPELGPPVGPSTFFSSKQFEVFDVELL++QNCERRTI AFYSDVVC+
Sbjct: 193 RPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQNCERRTI-AFYSDVVCN 248


>ref|XP_002327057.1| predicted protein [Populus trichocarpa] gi|222835372|gb|EEE73807.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  221 bits (563), Expect = 5e-56
 Identities = 101/117 (86%), Positives = 113/117 (96%)
 Frame = +1

Query: 4   DIEAGQGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGAPAKIRMGTNSLVPGFEEGIRDM 183
           D E G+GDCPKDGQQVTFHYVGYNESGRRIDSTYLQG+PAKIRMGTN+L+PGFEEGIRDM
Sbjct: 95  DFEVGEGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGSPAKIRMGTNALIPGFEEGIRDM 154

Query: 184 KPGGKRRVIIPPELGPPVGPSTFFSSKQFEVFDVELLNIQNCERRTILAFYSDVVCS 354
           +PGGKRR+I+PPELGPPVGPSTFFSSKQFEVFDVELLN+++C+RRTI  FYSDVVC+
Sbjct: 155 RPGGKRRIIVPPELGPPVGPSTFFSSKQFEVFDVELLNVKDCQRRTI-GFYSDVVCN 210


>ref|NP_567098.2| FKBP-type peptidyl-prolyl cis-trans isomerase 6 [Arabidopsis
           thaliana] gi|122236257|sp|Q0WRJ7.1|FK202_ARATH RecName:
           Full=Peptidyl-prolyl cis-trans isomerase FKBP20-2,
           chloroplastic; Short=PPIase FKBP20-2; AltName:
           Full=FK506-binding protein 20-2; Short=AtFKBP20-2;
           AltName: Full=Immunophilin FKBP20-2; AltName:
           Full=Rotamase; Flags: Precursor
           gi|110736573|dbj|BAF00252.1| hypothetical protein
           [Arabidopsis thaliana] gi|119360117|gb|ABL66787.1|
           At3g60370 [Arabidopsis thaliana]
           gi|332646531|gb|AEE80052.1| FKBP-type peptidyl-prolyl
           cis-trans isomerase 6 [Arabidopsis thaliana]
          Length = 242

 Score =  220 bits (560), Expect = 1e-55
 Identities = 101/117 (86%), Positives = 110/117 (94%)
 Frame = +1

Query: 4   DIEAGQGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGAPAKIRMGTNSLVPGFEEGIRDM 183
           D   GQGD PKDGQQVTFHY+GYNESGRRIDSTY+QG+PA+IRMGTN+LVPGFE GIRDM
Sbjct: 126 DFNVGQGDFPKDGQQVTFHYIGYNESGRRIDSTYIQGSPARIRMGTNALVPGFEMGIRDM 185

Query: 184 KPGGKRRVIIPPELGPPVGPSTFFSSKQFEVFDVELLNIQNCERRTILAFYSDVVCS 354
           KPGG+RR+IIPPELGPPVGPSTFFSSKQFEVFDVELL+IQNCERRTI+ FYSDV CS
Sbjct: 186 KPGGRRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIIGFYSDVTCS 242


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