BLASTX nr result

ID: Coptis25_contig00033740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033740
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328480.1| predicted protein [Populus trichocarpa] gi|2...   162   4e-38
ref|XP_002282176.1| PREDICTED: UPF0235 protein C15orf40 homolog ...   161   6e-38
ref|NP_001237633.1| uncharacterized protein LOC100527290 [Glycin...   160   2e-37
ref|NP_001238533.1| uncharacterized protein LOC100499954 [Glycin...   159   2e-37
emb|CAJ86041.1| H0723C07.11 [Oryza sativa Indica Group] gi|12555...   157   9e-37

>ref|XP_002328480.1| predicted protein [Populus trichocarpa] gi|222838195|gb|EEE76560.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score =  162 bits (410), Expect = 4e-38
 Identities = 80/112 (71%), Positives = 97/112 (86%)
 Frame = +2

Query: 8   SSTSPAATASKFPASLRHIPPSSVAITVHAKPGSKIATITDVNDDAVGVQIDAPPKDGEA 187
           S  +  +  + FP+ +R +PPSSVAIT+HAKPGSK A+ITD++D+AVGVQIDAP KDGEA
Sbjct: 19  SKPTAPSPQNNFPSCIRAVPPSSVAITIHAKPGSKSASITDLSDEAVGVQIDAPAKDGEA 78

Query: 188 NAALVDYISSVIGVKKRQVTIGSGSKSRDKVVVVEDVTLQIVFDALTKVSSC 343
           NAAL+DYISSV+GVK+RQV+IGSGSKSRDKVV+VE+VTLQ VFDAL K S C
Sbjct: 79  NAALLDYISSVLGVKRRQVSIGSGSKSRDKVVIVEEVTLQNVFDALEKASKC 130


>ref|XP_002282176.1| PREDICTED: UPF0235 protein C15orf40 homolog [Vitis vinifera]
           gi|147866968|emb|CAN83055.1| hypothetical protein
           VITISV_009894 [Vitis vinifera]
          Length = 128

 Score =  161 bits (408), Expect = 6e-38
 Identities = 80/113 (70%), Positives = 98/113 (86%)
 Frame = +2

Query: 8   SSTSPAATASKFPASLRHIPPSSVAITVHAKPGSKIATITDVNDDAVGVQIDAPPKDGEA 187
           S+ S  +  S FP+ +R +PPSSV+ITVHAKPGSK+++ITD +D+A+GVQIDAP KDGEA
Sbjct: 16  STQSSDSVNSSFPSCIRFVPPSSVSITVHAKPGSKVSSITDFDDEALGVQIDAPAKDGEA 75

Query: 188 NAALVDYISSVIGVKKRQVTIGSGSKSRDKVVVVEDVTLQIVFDALTKVSSCH 346
           NAAL+DYISSV+GVK+RQV+I SGSKSRDKVV+VE+VTLQ VFDAL KVS  H
Sbjct: 76  NAALLDYISSVVGVKRRQVSISSGSKSRDKVVIVEEVTLQGVFDALDKVSKSH 128


>ref|NP_001237633.1| uncharacterized protein LOC100527290 [Glycine max]
           gi|255632017|gb|ACU16361.1| unknown [Glycine max]
          Length = 126

 Score =  160 bits (404), Expect = 2e-37
 Identities = 76/108 (70%), Positives = 96/108 (88%)
 Frame = +2

Query: 14  TSPAATASKFPASLRHIPPSSVAITVHAKPGSKIATITDVNDDAVGVQIDAPPKDGEANA 193
           T+P+   + FP+ +R +PPSSVAIT+HAKPGSK A++TD++D+AVGVQIDAP +DGEANA
Sbjct: 16  TTPSEKPNDFPSCIRSVPPSSVAITIHAKPGSKSASVTDISDEAVGVQIDAPARDGEANA 75

Query: 194 ALVDYISSVIGVKKRQVTIGSGSKSRDKVVVVEDVTLQIVFDALTKVS 337
           AL+DYISSV+GVK+RQV++G+GSKSRDK V+VEDVT Q VFDAL KVS
Sbjct: 76  ALLDYISSVLGVKRRQVSLGTGSKSRDKTVIVEDVTQQYVFDALDKVS 123


>ref|NP_001238533.1| uncharacterized protein LOC100499954 [Glycine max]
           gi|255627953|gb|ACU14321.1| unknown [Glycine max]
          Length = 126

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/111 (68%), Positives = 97/111 (87%)
 Frame = +2

Query: 14  TSPAATASKFPASLRHIPPSSVAITVHAKPGSKIATITDVNDDAVGVQIDAPPKDGEANA 193
           T+P+   + FP+ ++ +PPSSVAIT+HAKPG+K A+ITD++D+AVGVQIDAP +DGEANA
Sbjct: 16  TTPSEKPNDFPSCIQSVPPSSVAITIHAKPGAKSASITDISDEAVGVQIDAPARDGEANA 75

Query: 194 ALVDYISSVIGVKKRQVTIGSGSKSRDKVVVVEDVTLQIVFDALTKVSSCH 346
           AL+DYISSV+GVK+RQV++G+GSKSRDK V+VEDVT Q VFDAL KVS  H
Sbjct: 76  ALLDYISSVLGVKRRQVSLGTGSKSRDKTVIVEDVTQQYVFDALDKVSKQH 126


>emb|CAJ86041.1| H0723C07.11 [Oryza sativa Indica Group] gi|125550304|gb|EAY96126.1|
           hypothetical protein OsI_18003 [Oryza sativa Indica
           Group]
          Length = 125

 Score =  157 bits (398), Expect = 9e-37
 Identities = 78/104 (75%), Positives = 94/104 (90%)
 Frame = +2

Query: 20  PAATASKFPASLRHIPPSSVAITVHAKPGSKIATITDVNDDAVGVQIDAPPKDGEANAAL 199
           PAA A  FPA LR +PPS+VAI++HAKPGSK+ATIT++ D+AVGVQIDAP +DGEANAAL
Sbjct: 17  PAAAAGGFPACLRLMPPSTVAISIHAKPGSKLATITEIGDEAVGVQIDAPARDGEANAAL 76

Query: 200 VDYISSVIGVKKRQVTIGSGSKSRDKVVVVEDVTLQIVFDALTK 331
           VD+ISSV+GVKKR+V+IGSGSKSR+KVV+V+D TLQ VFDAL K
Sbjct: 77  VDFISSVLGVKKREVSIGSGSKSREKVVLVQDATLQGVFDALKK 120


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