BLASTX nr result

ID: Coptis25_contig00033726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033726
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ34572.1| unnamed protein product [Thellungiella halophila]      93   8e-17
ref|XP_002869687.1| hypothetical protein ARALYDRAFT_914065 [Arab...    91   2e-16
ref|XP_002510978.1| conserved hypothetical protein [Ricinus comm...    91   2e-16
emb|CAA23058.1| putative protein [Arabidopsis thaliana] gi|72693...    91   3e-16
ref|NP_567716.1| uncharacterized protein [Arabidopsis thaliana] ...    91   3e-16

>dbj|BAJ34572.1| unnamed protein product [Thellungiella halophila]
          Length = 347

 Score = 92.8 bits (229), Expect = 8e-17
 Identities = 48/103 (46%), Positives = 66/103 (64%)
 Frame = +3

Query: 483 VFGPVPSRDEVDDAVSSLQHFLAPASYSQFILDGMSSSSENDSVNPTSFPPGLMHRVPSS 662
           VFG VPS DEV DAVS+LQ     +SY Q + D   S  EN     +    G++H+VPS 
Sbjct: 119 VFGSVPSVDEVQDAVSALQQVFDGSSYPQLVRDRYESYPENGGGKQSPIATGMVHQVPSF 178

Query: 663 GSEMEWMEPSLQLYNSTMVQSHRGQAARVYDAFRMLKNDPSVQ 791
           GS+++WMEPS+QL  S ++Q H     +VY+AF +L+ +PSVQ
Sbjct: 179 GSDLDWMEPSMQLCQSRVLQPHAYD--QVYNAFDLLRTEPSVQ 219


>ref|XP_002869687.1| hypothetical protein ARALYDRAFT_914065 [Arabidopsis lyrata subsp.
           lyrata] gi|297315523|gb|EFH45946.1| hypothetical protein
           ARALYDRAFT_914065 [Arabidopsis lyrata subsp. lyrata]
          Length = 345

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 51/121 (42%), Positives = 74/121 (61%)
 Frame = +3

Query: 429 GGENDDGIVNKVNDINRFVFGPVPSRDEVDDAVSSLQHFLAPASYSQFILDGMSSSSEND 608
           GG  D   V++  D +  +FG VPS DEV DAVS+LQ     +SY+Q + D      E+ 
Sbjct: 101 GGYEDFEWVSEEEDDS--LFGSVPSVDEVQDAVSALQQVFDASSYTQLVRDKYECYPESG 158

Query: 609 SVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNSTMVQSHRGQAARVYDAFRMLKNDPSV 788
             N +    G++H+VPS GS+ +WMEPS+QL +S  +Q H     +VY+AF +L+ +PSV
Sbjct: 159 GENQSPIATGMVHQVPSFGSDSDWMEPSMQLCHSRTLQPHAYD--QVYNAFDLLRTEPSV 216

Query: 789 Q 791
           Q
Sbjct: 217 Q 217


>ref|XP_002510978.1| conserved hypothetical protein [Ricinus communis]
           gi|223550093|gb|EEF51580.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 342

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 50/104 (48%), Positives = 63/104 (60%)
 Frame = +3

Query: 480 FVFGPVPSRDEVDDAVSSLQHFLAPASYSQFILDGMSSSSENDSVNPTSFPPGLMHRVPS 659
           FV GPVPS DEV  AVS+L      ASYSQFI D  + + +    +  S P G++HR   
Sbjct: 116 FVLGPVPSLDEVHSAVSALTQVFDAASYSQFITDKFAYNVDRPVADQISSPTGILHRASP 175

Query: 660 SGSEMEWMEPSLQLYNSTMVQSHRGQAARVYDAFRMLKNDPSVQ 791
              E +WMEPS  L NS M+Q  R    RVYDAF +L+N+PS+Q
Sbjct: 176 VCPEADWMEPSPHLCNSRMLQ--RYGPDRVYDAFHLLQNEPSIQ 217


>emb|CAA23058.1| putative protein [Arabidopsis thaliana] gi|7269367|emb|CAB79426.1|
           putative protein [Arabidopsis thaliana]
          Length = 336

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 51/121 (42%), Positives = 74/121 (61%)
 Frame = +3

Query: 429 GGENDDGIVNKVNDINRFVFGPVPSRDEVDDAVSSLQHFLAPASYSQFILDGMSSSSEND 608
           GG +D   V++  D +  +FG VPS DEV DAVS+LQ     +SYSQ + D      EN 
Sbjct: 94  GGYDDFEWVSEEEDDS--LFGSVPSVDEVQDAVSALQQVFDASSYSQLVRDKYECYPENG 151

Query: 609 SVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNSTMVQSHRGQAARVYDAFRMLKNDPSV 788
             N +    G++H+VPS GS+ +WMEPS+ L +S  ++ H     +VY+AF +L+ +PSV
Sbjct: 152 GGNQSPIATGMVHQVPSFGSDSDWMEPSMHLCHSRTLKPHAYD--QVYNAFDLLRTEPSV 209

Query: 789 Q 791
           Q
Sbjct: 210 Q 210


>ref|NP_567716.1| uncharacterized protein [Arabidopsis thaliana]
           gi|17979333|gb|AAL49892.1| unknown protein [Arabidopsis
           thaliana] gi|21593405|gb|AAM65372.1| unknown
           [Arabidopsis thaliana] gi|21689835|gb|AAM67561.1|
           unknown protein [Arabidopsis thaliana]
           gi|332659619|gb|AEE85019.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 344

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 51/121 (42%), Positives = 74/121 (61%)
 Frame = +3

Query: 429 GGENDDGIVNKVNDINRFVFGPVPSRDEVDDAVSSLQHFLAPASYSQFILDGMSSSSEND 608
           GG +D   V++  D +  +FG VPS DEV DAVS+LQ     +SYSQ + D      EN 
Sbjct: 102 GGYDDFEWVSEEEDDS--LFGSVPSVDEVQDAVSALQQVFDASSYSQLVRDKYECYPENG 159

Query: 609 SVNPTSFPPGLMHRVPSSGSEMEWMEPSLQLYNSTMVQSHRGQAARVYDAFRMLKNDPSV 788
             N +    G++H+VPS GS+ +WMEPS+ L +S  ++ H     +VY+AF +L+ +PSV
Sbjct: 160 GGNQSPIATGMVHQVPSFGSDSDWMEPSMHLCHSRTLKPHAYD--QVYNAFDLLRTEPSV 217

Query: 789 Q 791
           Q
Sbjct: 218 Q 218


Top