BLASTX nr result

ID: Coptis25_contig00033724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033724
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566529.1| palmitoyl-monogalactosyldiacylglycerol delta-7 ...    82   3e-14
ref|XP_002882967.1| hypothetical protein ARALYDRAFT_479040 [Arab...    82   3e-14
dbj|BAC43716.1| putative delta 9 desaturase [Arabidopsis thaliana]     82   5e-14
dbj|BAB02317.1| fatty-acid desaturase-like protein [Arabidopsis ...    82   5e-14
ref|XP_002889586.1| predicted protein [Arabidopsis lyrata subsp....    82   5e-14

>ref|NP_566529.1| palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase
           [Arabidopsis thaliana]
           gi|62510457|sp|Q949X0.2|ADS3_ARATH RecName:
           Full=Palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase, chloroplastic; AltName: Full=FAD5; AltName:
           Full=Monogalactosyldiacylglycerol-specific palmitic acid
           desaturase; Flags: Precursor gi|11994357|dbj|BAB02316.1|
           delta 9 desaturase-like protein [Arabidopsis thaliana]
           gi|24030393|gb|AAN41357.1| putative delta 9 desaturase
           [Arabidopsis thaliana] gi|48927606|dbj|BAD23903.1|
           monogalactosyldiacylglycerol-specific palmitic acid
           desaturase [Arabidopsis thaliana]
           gi|57546098|gb|AAW51920.1|
           palmitoyl-monogalactosyldiacylglycerol delta7-desaturase
           [Arabidopsis thaliana] gi|332642216|gb|AEE75737.1|
           palmitoyl-monogalactosyldiacylglycerol delta-7
           desaturase [Arabidopsis thaliana]
          Length = 371

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/93 (45%), Positives = 54/93 (58%)
 Frame = +3

Query: 18  HSYHHKFTDTDRDPHSPIKGFWFSHMGWIFYDNYHVPMQMQCQLLVR*NDSYDVL*GENY 197
           H YHH+F D+DRDPHSP+ GFWFSHM W+F  N    +  +C              GE  
Sbjct: 185 HRYHHQFCDSDRDPHSPLDGFWFSHMNWMFDTN---TITQRC--------------GEPN 227

Query: 198 VNVGDLVRQCYYRFMETTVVIHIYLHAVLLYML 296
            NVGDL +Q +YRF+ TT ++H    AV LY +
Sbjct: 228 -NVGDLEKQPFYRFLRTTYILHPLALAVALYAM 259


>ref|XP_002882967.1| hypothetical protein ARALYDRAFT_479040 [Arabidopsis lyrata subsp.
           lyrata] gi|297328807|gb|EFH59226.1| hypothetical protein
           ARALYDRAFT_479040 [Arabidopsis lyrata subsp. lyrata]
          Length = 371

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/93 (45%), Positives = 54/93 (58%)
 Frame = +3

Query: 18  HSYHHKFTDTDRDPHSPIKGFWFSHMGWIFYDNYHVPMQMQCQLLVR*NDSYDVL*GENY 197
           H YHH+F D+DRDPHSP+ GFWFSHM W+F  N    +  +C              GE  
Sbjct: 185 HRYHHQFCDSDRDPHSPLDGFWFSHMNWMFDTN---TITQRC--------------GEPN 227

Query: 198 VNVGDLVRQCYYRFMETTVVIHIYLHAVLLYML 296
            NVGDL +Q +YRF+ TT ++H    AV LY +
Sbjct: 228 -NVGDLEKQPFYRFLRTTYILHPVALAVALYAM 259


>dbj|BAC43716.1| putative delta 9 desaturase [Arabidopsis thaliana]
          Length = 305

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/91 (45%), Positives = 51/91 (56%)
 Frame = +3

Query: 18  HSYHHKFTDTDRDPHSPIKGFWFSHMGWIFYDNYHVPMQMQCQLLVR*NDSYDVL*GENY 197
           H YHH+FTD+DRDPHSP +GFWFSH+ W+F   Y V    +C                  
Sbjct: 120 HRYHHQFTDSDRDPHSPNEGFWFSHLLWLFDTGYRVE---KC---------------GRR 161

Query: 198 VNVGDLVRQCYYRFMETTVVIHIYLHAVLLY 290
            NV DL RQ YY+F++ TV+ HI     LLY
Sbjct: 162 TNVEDLKRQWYYKFLQRTVLYHILTFGFLLY 192


>dbj|BAB02317.1| fatty-acid desaturase-like protein [Arabidopsis thaliana]
          Length = 314

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
 Frame = +3

Query: 18  HSYHHKFTDTDRDPHSPIKGFWFSHMGWIF------YDNYHVPMQMQCQLLVR*NDSYDV 179
           H YHHK  +T RDPHSP +GFWFSHM WIF       +N   P++ +   L +   +   
Sbjct: 108 HRYHHKHCETQRDPHSPTQGFWFSHMAWIFDTSSILENNTLFPIRGRDLTLTKPLGACSQ 167

Query: 180 L*GENYVNVGDLVRQCYYRFMETTVVIHIYLHAVLLY 290
             GE   NV DLVRQ +YRF++ TV++H+  ++ L Y
Sbjct: 168 CGGEE--NVDDLVRQPFYRFLQRTVLLHMMAYSFLFY 202


>ref|XP_002889586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335428|gb|EFH65845.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 299

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/92 (44%), Positives = 59/92 (64%)
 Frame = +3

Query: 18  HSYHHKFTDTDRDPHSPIKGFWFSHMGWIFYDNYHVPMQMQCQLLVR*NDSYDVL*GENY 197
           H +HH+FTD+DRDPHSPI+GFWFSH+ WIF   Y   ++ +C    R N           
Sbjct: 114 HRFHHQFTDSDRDPHSPIEGFWFSHVLWIFDSEY---IREKCG---RRN----------- 156

Query: 198 VNVGDLVRQCYYRFMETTVVIHIYLHAVLLYM 293
            NV DL +Q +YRF++ T+V+HI++   L+Y+
Sbjct: 157 -NVMDLKQQWFYRFLKKTLVLHIFVFWTLIYL 187


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