BLASTX nr result

ID: Coptis25_contig00033716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033716
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK49035.1| unknown [Lotus japonicus]                              101   5e-24
emb|CBI32844.3| unnamed protein product [Vitis vinifera]               96   9e-24
ref|XP_002278437.2| PREDICTED: uncharacterized protein LOC100263...    96   9e-24
ref|XP_003520286.1| PREDICTED: uncharacterized protein LOC100779...    97   2e-23
ref|XP_002524551.1| polyglutamine binding protein, putative [Ric...   100   7e-23

>gb|AFK49035.1| unknown [Lotus japonicus]
          Length = 278

 Score =  101 bits (252), Expect(2) = 5e-24
 Identities = 46/88 (52%), Positives = 58/88 (65%)
 Frame = +3

Query: 81  STLHL*PDWKEALDETTGQRDYYNTKTHVSQWNKPESVEQNASQRGAMMLSAKSPAESGS 260
           S LHL  +W EALDETTG + YYNTKTHVSQW  P S ++  S    + + +++      
Sbjct: 47  SPLHLSENWVEALDETTGHKYYYNTKTHVSQWEHPSSSQKVVSDHSDLSVGSRN-----D 101

Query: 261 KSSISRKCMGCCGWGLDLVQDWGYCNHC 344
           + S  +KCMGC GWG+ LVQ WGYCNHC
Sbjct: 102 QLSTLQKCMGCGGWGVGLVQAWGYCNHC 129



 Score = 34.3 bits (77), Expect(2) = 5e-24
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +1

Query: 10 FYYNPNTSKSQWESPLETATGSRSP 84
          +YYN +T KSQWE P E ++  +SP
Sbjct: 22 YYYNESTGKSQWEKPHEASSIEQSP 46


>emb|CBI32844.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 96.3 bits (238), Expect(2) = 9e-24
 Identities = 47/96 (48%), Positives = 59/96 (61%), Gaps = 8/96 (8%)
 Frame = +3

Query: 81  STLHL*PDWKEALDETTGQRDYYNTKTHVSQWNKPESVEQ--NASQR------GAMMLSA 236
           S L L  DW+EALD TTGQ+ YYN KT  SQW  P +V+Q  N  Q+      G M+ S 
Sbjct: 290 SPLSLPEDWEEALDVTTGQKYYYNRKTQASQWEPPNTVQQVPNTVQQVASGHSGNMVFSN 349

Query: 237 KSPAESGSKSSISRKCMGCCGWGLDLVQDWGYCNHC 344
                   +S++ ++CMGC GWG+ LVQ WGYCNHC
Sbjct: 350 AVNGNQDDRSAMLKRCMGCGGWGVGLVQMWGYCNHC 385



 Score = 38.9 bits (89), Expect(2) = 9e-24
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +1

Query: 1   GSVFYYNPNTSKSQWESPLETATGSRSP 84
           G+ +YYN NT  SQWE P+ET+  S+ P
Sbjct: 262 GASYYYNENTGMSQWERPVETSFSSQPP 289


>ref|XP_002278437.2| PREDICTED: uncharacterized protein LOC100263596 [Vitis vinifera]
          Length = 514

 Score = 96.3 bits (238), Expect(2) = 9e-24
 Identities = 47/96 (48%), Positives = 59/96 (61%), Gaps = 8/96 (8%)
 Frame = +3

Query: 81  STLHL*PDWKEALDETTGQRDYYNTKTHVSQWNKPESVEQ--NASQR------GAMMLSA 236
           S L L  DW+EALD TTGQ+ YYN KT  SQW  P +V+Q  N  Q+      G M+ S 
Sbjct: 272 SPLSLPEDWEEALDVTTGQKYYYNRKTQASQWEPPNTVQQVPNTVQQVASGHSGNMVFSN 331

Query: 237 KSPAESGSKSSISRKCMGCCGWGLDLVQDWGYCNHC 344
                   +S++ ++CMGC GWG+ LVQ WGYCNHC
Sbjct: 332 AVNGNQDDRSAMLKRCMGCGGWGVGLVQMWGYCNHC 367



 Score = 38.9 bits (89), Expect(2) = 9e-24
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +1

Query: 1   GSVFYYNPNTSKSQWESPLETATGSRSP 84
           G+ +YYN NT  SQWE P+ET+  S+ P
Sbjct: 244 GASYYYNENTGMSQWERPVETSFSSQPP 271


>ref|XP_003520286.1| PREDICTED: uncharacterized protein LOC100779869 [Glycine max]
          Length = 540

 Score = 97.4 bits (241), Expect(2) = 2e-23
 Identities = 46/88 (52%), Positives = 56/88 (63%)
 Frame = +3

Query: 81  STLHL*PDWKEALDETTGQRDYYNTKTHVSQWNKPESVEQNASQRGAMMLSAKSPAESGS 260
           S+ HL  +W EA+DETTG + YYNTKTHVSQW +P  V++  S       S  S      
Sbjct: 311 SSSHLPENWVEAMDETTGHKYYYNTKTHVSQWERPNLVQEVVSNH-----SDLSAGGGYD 365

Query: 261 KSSISRKCMGCCGWGLDLVQDWGYCNHC 344
           +SS   +CMGC GWG+ LVQ WGYCNHC
Sbjct: 366 QSSNFPQCMGCGGWGVGLVQAWGYCNHC 393



 Score = 36.2 bits (82), Expect(2) = 2e-23
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +1

Query: 1   GSVFYYNPNTSKSQWESPLETATGSRSP 84
           G+ +YYN +T KSQWE P E+    +SP
Sbjct: 283 GACYYYNESTGKSQWEKPQESYLTEQSP 310


>ref|XP_002524551.1| polyglutamine binding protein, putative [Ricinus communis]
           gi|223536181|gb|EEF37835.1| polyglutamine binding
           protein, putative [Ricinus communis]
          Length = 358

 Score =  100 bits (249), Expect(2) = 7e-23
 Identities = 47/88 (53%), Positives = 58/88 (65%)
 Frame = +3

Query: 81  STLHL*PDWKEALDETTGQRDYYNTKTHVSQWNKPESVEQNASQRGAMMLSAKSPAESGS 260
           S L L  DW E++DETTG + YYNTKTHVSQW  P+S +  ASQ+ +    + +      
Sbjct: 232 SLLPLLGDWVESVDETTGYKYYYNTKTHVSQWEHPDSSQFVASQKQSNSTDSGNYLAWDG 291

Query: 261 KSSISRKCMGCCGWGLDLVQDWGYCNHC 344
           +SS  +KCMGC GWG  LVQ WGYCNHC
Sbjct: 292 QSSELKKCMGCGGWGAGLVQAWGYCNHC 319



 Score = 31.6 bits (70), Expect(2) = 7e-23
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 1   GSVFYYNPNTSKSQWESPLETATGSRSP 84
           G  +YYN +  KSQWE P+E++  +  P
Sbjct: 204 GVSYYYNESIGKSQWERPIESSLITHIP 231


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