BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033710
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15512.3| unnamed protein product [Vitis vinifera]              116   2e-24
emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]   111   5e-23
ref|XP_002521455.1| pentatricopeptide repeat-containing protein,...   110   9e-23
ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22

>emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/113 (50%), Positives = 83/113 (73%)
 Frame = -3

Query: 341 GVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEA 162
           GV I  ++Y+YL VALC+ENRP AAK+LL R+  DG +P LE+YNELI+  C+ D + EA
Sbjct: 428 GVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEA 487

Query: 161 LSLKDEMIEKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPDSDI 3
           L LK EM++K +KP+L +YR +I  L +L R+ EGE ++ E+V + ++PD +I
Sbjct: 488 LLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEI 540



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/110 (30%), Positives = 51/110 (46%)
 Frame = -3

Query: 341 GVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEA 162
           G+   L  +N L   LC++         L ++  +G +P +  YN LI   C+   L +A
Sbjct: 253 GIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDA 312

Query: 161 LSLKDEMIEKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPD 12
             L   M  +G+ PDL SY  L++ LCK  R  E   +   +V   L PD
Sbjct: 313 FYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPD 362



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/103 (31%), Positives = 50/103 (48%)
 Frame = -3

Query: 317 YNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEALSLKDEMI 138
           YN L  + C++ R   A  L + +   G  P L  Y  L+  LCK   + EA  L   M+
Sbjct: 296 YNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMV 355

Query: 137 EKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPDS 9
            +GL PD+ +Y  LI   CK  +  E   ++ +++   + PDS
Sbjct: 356 HRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDS 398



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/98 (35%), Positives = 48/98 (48%)
 Frame = -3

Query: 341 GVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEA 162
           GV+  L  Y  L   LC+E R   A  L  R+V  G  P +  YN LI   CK   + E+
Sbjct: 323 GVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQES 382

Query: 161 LSLKDEMIEKGLKPDLFSYRILISSLCKLHRTAEGEFM 48
            SL  +MI  G+ PD F+  +L+    K     EG+F+
Sbjct: 383 RSLLHDMIWNGISPDSFTCWVLVEGYGK-----EGKFL 415


>emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/113 (48%), Positives = 81/113 (71%)
 Frame = -3

Query: 341 GVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEA 162
           GV I  ++Y+YL VALC+ENRP AAK+LL R+  DG +  LE+YNELI+  C+ D + EA
Sbjct: 473 GVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEA 532

Query: 161 LSLKDEMIEKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPDSDI 3
           L LK EM++K +KP+L +YR ++  L +L R+ EGE ++ E+V +  +PD +I
Sbjct: 533 LLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEI 585



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/110 (30%), Positives = 51/110 (46%)
 Frame = -3

Query: 341 GVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEA 162
           G+   L  +N L   LC++         L ++  +G +P +  YN LI   C+   L +A
Sbjct: 298 GIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDA 357

Query: 161 LSLKDEMIEKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPD 12
             L   M  +G+ PDL SY  L++ LCK  R  E   +   +V   L PD
Sbjct: 358 FYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPD 407



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/103 (31%), Positives = 50/103 (48%)
 Frame = -3

Query: 317 YNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEALSLKDEMI 138
           YN L  + C++ R   A  L + +   G  P L  Y  L+  LCK   + EA  L   M+
Sbjct: 341 YNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMV 400

Query: 137 EKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPDS 9
            +GL PD+ +Y  LI   CK  +  E   ++ +++   + PDS
Sbjct: 401 HRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDS 443



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/98 (35%), Positives = 48/98 (48%)
 Frame = -3

Query: 341 GVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEA 162
           GV+  L  Y  L   LC+E R   A  L  R+V  G  P +  YN LI   CK   + E+
Sbjct: 368 GVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQES 427

Query: 161 LSLKDEMIEKGLKPDLFSYRILISSLCKLHRTAEGEFM 48
            SL  +MI  G+ PD F+  +L+    K     EG+F+
Sbjct: 428 RSLLHDMIWNGISPDSFTCWVLVEGYGK-----EGKFL 460


>ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539354|gb|EEF40945.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score =  110 bits (276), Expect = 9e-23
 Identities = 52/113 (46%), Positives = 79/113 (69%)
 Frame = -3

Query: 341 GVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEA 162
           GV I  ++Y+YL V++C+E RP AAKSLL+RI   G  P +E+YN+LI+ LCKSD + +A
Sbjct: 419 GVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADA 478

Query: 161 LSLKDEMIEKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPDSDI 3
           L +K EM  + +KP   +Y+ LI  LC+  R+ E E +M+E++ + ++PD DI
Sbjct: 479 LLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDI 531



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/102 (31%), Positives = 47/102 (46%)
 Frame = -3

Query: 317 YNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEALSLKDEMI 138
           +N L    CQ+         L R+  +G EP +  YN LI C C+   L +A  L   M 
Sbjct: 252 FNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMY 311

Query: 137 EKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPD 12
            + + PDL SY  L++ LCK  +  E   +   ++   L PD
Sbjct: 312 RRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPD 353



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/102 (33%), Positives = 49/102 (48%)
 Frame = -3

Query: 317 YNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEALSLKDEMI 138
           YN L    C++ R   A  L R +      P L  Y  L+  LCK   + EA  L   MI
Sbjct: 287 YNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMI 346

Query: 137 EKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPD 12
            +GL PD+ S+  LI   CK  +  E   ++ E++G+ + PD
Sbjct: 347 HRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPD 388


>ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 636

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/114 (43%), Positives = 83/114 (72%)
 Frame = -3

Query: 344 LGVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTE 165
           LGV +  ++Y YL ++LC+E+RP AAKSLL RI+ D  +P  ++YN+LI+  C+S+ ++E
Sbjct: 429 LGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSE 488

Query: 164 ALSLKDEMIEKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPDSDI 3
           AL LK EMI +  KP   +Y+ LI  +C+++R+ +GE +M E+V ++++PD +I
Sbjct: 489 ALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEI 542



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/83 (40%), Positives = 44/83 (53%)
 Frame = -3

Query: 341 GVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEA 162
           GV+  L  Y  L   LC+  R   A  L  R++  G +P + +YN LI   CK   L EA
Sbjct: 325 GVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEA 384

Query: 161 LSLKDEMIEKGLKPDLFSYRILI 93
            SL  EMI  G+ PD F+ RIL+
Sbjct: 385 RSLLHEMIGIGIHPDSFTCRILV 407



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/111 (27%), Positives = 51/111 (45%)
 Frame = -3

Query: 344 LGVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTE 165
           +GV      +N L   LC++   +     L ++  +G +P +  YN LI    +   L +
Sbjct: 254 IGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLED 313

Query: 164 ALSLKDEMIEKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPD 12
           A  L   M  +G+ PDL SY  L+  LC+L R  E   +   ++   + PD
Sbjct: 314 AFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPD 364


>ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 632

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/114 (43%), Positives = 83/114 (72%)
 Frame = -3

Query: 344 LGVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTE 165
           LGV +  ++Y YL ++LC+E+RP AAKSLL RI+ D  +P  ++YN+LI+  C+S+ ++E
Sbjct: 425 LGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSE 484

Query: 164 ALSLKDEMIEKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPDSDI 3
           AL LK EMI +  KP   +Y+ LI  +C+++R+ +GE +M E+V ++++PD +I
Sbjct: 485 ALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEI 538



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/83 (40%), Positives = 44/83 (53%)
 Frame = -3

Query: 341 GVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTEA 162
           GV+  L  Y  L   LC+  R   A  L  R++  G +P + +YN LI   CK   L EA
Sbjct: 321 GVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEA 380

Query: 161 LSLKDEMIEKGLKPDLFSYRILI 93
            SL  EMI  G+ PD F+ RIL+
Sbjct: 381 RSLLHEMIGIGIHPDSFTCRILV 403



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/111 (27%), Positives = 51/111 (45%)
 Frame = -3

Query: 344 LGVLIPLEVYNYLGVALCQENRPHAAKSLLRRIVIDGCEPSLEMYNELIQCLCKSDGLTE 165
           +GV      +N L   LC++   +     L ++  +G +P +  YN LI    +   L +
Sbjct: 250 IGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLED 309

Query: 164 ALSLKDEMIEKGLKPDLFSYRILISSLCKLHRTAEGEFMMKELVGTDLVPD 12
           A  L   M  +G+ PDL SY  L+  LC+L R  E   +   ++   + PD
Sbjct: 310 AFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPD 360