BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033697
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              67   1e-09
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              67   1e-09
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              66   3e-09
ref|NP_680382.1| RNase H domain-containing protein [Arabidopsis ...    65   6e-09
dbj|BAB09192.1| non-LTR retroelement reverse transcriptase-like ...    65   6e-09

>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/119 (33%), Positives = 62/119 (52%)
 Frame = +1

Query: 31   WVGWSLPPVGWYKLNTDGAALGCPGPSGAGVIVRNDYGGFACGLSVPFKRASAMFMEFYA 210
            WV WS P  G+ KLN+DGA       + AG ++RN+ G +  G +     A++   E + 
Sbjct: 1729 WVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWG 1788

Query: 211  LRLGLRAAKSLKFECLIVEVNSYLCPAVLNELEDIPMEVVVLLDDIKHLMNVIPEVKMT 387
            LR GL  AK+  F  LI E +S     VL +   +  +  +L+ D K L++   E+K+T
Sbjct: 1789 LREGLLLAKNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVT 1847


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/119 (33%), Positives = 62/119 (52%)
 Frame = +1

Query: 31   WVGWSLPPVGWYKLNTDGAALGCPGPSGAGVIVRNDYGGFACGLSVPFKRASAMFMEFYA 210
            WV WS P  G+ KLN+DGA       + AG ++RN+ G +  G +     A++   E + 
Sbjct: 1197 WVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTANSFLAELWG 1256

Query: 211  LRLGLRAAKSLKFECLIVEVNSYLCPAVLNELEDIPMEVVVLLDDIKHLMNVIPEVKMT 387
            LR GL  AK+  F  LI E +S     VL +   +  +  +L+ D K L++   E+K+T
Sbjct: 1257 LREGLLLAKNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVT 1315


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/119 (33%), Positives = 61/119 (51%)
 Frame = +1

Query: 31   WVGWSLPPVGWYKLNTDGAALGCPGPSGAGVIVRNDYGGFACGLSVPFKRASAMFMEFYA 210
            WV WS P  G+ KLN+DGA       + AG ++RN+ G +  G       A++   E + 
Sbjct: 1197 WVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYICNIGTANSFLAELWG 1256

Query: 211  LRLGLRAAKSLKFECLIVEVNSYLCPAVLNELEDIPMEVVVLLDDIKHLMNVIPEVKMT 387
            LR GL  AK+  F  LI E +S     VL +   +  +  +L+ D K L++   E+K+T
Sbjct: 1257 LREGLLLAKNRGFTKLIAETDSEAVVQVLRKDGPVTPDASILVKDCKLLLDHFQEIKVT 1315


>ref|NP_680382.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|332007502|gb|AED94885.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 258

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/90 (40%), Positives = 51/90 (56%)
 Frame = +1

Query: 7   SAQDKVPIWVGWSLPPVGWYKLNTDGAALGCPGPSGAGVIVRNDYGGFACGLSVPFKRAS 186
           S Q +V   +GW LP VGW K+NTDGA+ G PG + AG ++R+  G +  G S+   R S
Sbjct: 129 STQPRVERLIGWVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCS 188

Query: 187 AMFMEFYALRLGLRAAKSLKFECLIVEVNS 276
           A   E + +  GL  A   K   + +EV+S
Sbjct: 189 AQHAELWGVYYGLYFAWEKKVPRVELEVDS 218


>dbj|BAB09192.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 308

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/90 (40%), Positives = 51/90 (56%)
 Frame = +1

Query: 7   SAQDKVPIWVGWSLPPVGWYKLNTDGAALGCPGPSGAGVIVRNDYGGFACGLSVPFKRAS 186
           S Q +V   +GW LP VGW K+NTDGA+ G PG + AG ++R+  G +  G S+   R S
Sbjct: 129 STQPRVERLIGWVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCS 188

Query: 187 AMFMEFYALRLGLRAAKSLKFECLIVEVNS 276
           A   E + +  GL  A   K   + +EV+S
Sbjct: 189 AQHAELWGVYYGLYFAWEKKVPRVELEVDS 218