BLASTX nr result

ID: Coptis25_contig00033695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033695
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546091.1| PREDICTED: putative chromatin-remodeling com...    56   3e-06
ref|XP_003546090.1| PREDICTED: putative chromatin-remodeling com...    56   3e-06
ref|XP_003550172.1| PREDICTED: putative chromatin-remodeling com...    55   8e-06
ref|XP_003529588.1| PREDICTED: putative chromatin-remodeling com...    55   8e-06

>ref|XP_003546091.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
           isoform 2 [Glycine max]
          Length = 1064

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = -1

Query: 110 VKPEVARKEKARLKEMERIKKQKVQEILSKQNAAID 3
           V PE++++EKARLKEM+++KKQK+QEIL  QNAAID
Sbjct: 75  VDPEISKREKARLKEMQKMKKQKIQEILDVQNAAID 110


>ref|XP_003546090.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
           isoform 1 [Glycine max]
          Length = 1072

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = -1

Query: 110 VKPEVARKEKARLKEMERIKKQKVQEILSKQNAAID 3
           V PE++++EKARLKEM+++KKQK+QEIL  QNAAID
Sbjct: 83  VDPEISKREKARLKEMQKMKKQKIQEILDVQNAAID 118


>ref|XP_003550172.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
           [Glycine max]
          Length = 1059

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/36 (69%), Positives = 32/36 (88%)
 Frame = -1

Query: 110 VKPEVARKEKARLKEMERIKKQKVQEILSKQNAAID 3
           V PEV+++EKARL+EM+++KKQKVQEIL  QNA ID
Sbjct: 71  VDPEVSKREKARLREMQQLKKQKVQEILDAQNATID 106


>ref|XP_003529588.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
           [Glycine max]
          Length = 1058

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/36 (69%), Positives = 32/36 (88%)
 Frame = -1

Query: 110 VKPEVARKEKARLKEMERIKKQKVQEILSKQNAAID 3
           V PEV+++EKARL+EM+++KKQKVQEIL  QNA ID
Sbjct: 70  VDPEVSKREKARLREMQQLKKQKVQEILDAQNATID 105


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