BLASTX nr result

ID: Coptis25_contig00033688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033688
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279278.2| PREDICTED: nipped-B-like protein-like [Vitis...    67   2e-10
emb|CBI22299.3| unnamed protein product [Vitis vinifera]               67   2e-10
ref|XP_002324104.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-08
ref|XP_002526100.1| pearli, putative [Ricinus communis] gi|22353...    60   2e-07
ref|XP_004137294.1| PREDICTED: nipped-B-like protein-like [Cucum...    56   3e-07

>ref|XP_002279278.2| PREDICTED: nipped-B-like protein-like [Vitis vinifera]
          Length = 1967

 Score = 67.0 bits (162), Expect(2) = 2e-10
 Identities = 33/55 (60%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +3

Query: 3    CKLQQADGGK-NHTVSDSNSEALESVAKVEVIQQMFLNYLQDATSTDDAHLFVRW 164
            CK Q  D  K N   SD NSEA + + KVE++QQM LNYL DA S+DD HLFVRW
Sbjct: 920  CKSQCKDDEKRNRARSDKNSEASDPITKVEIVQQMLLNYLHDAGSSDDVHLFVRW 974



 Score = 23.1 bits (48), Expect(2) = 2e-10
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 241 FYLCLWY 261
           FYLCLWY
Sbjct: 975 FYLCLWY 981


>emb|CBI22299.3| unnamed protein product [Vitis vinifera]
          Length = 1748

 Score = 67.0 bits (162), Expect(2) = 2e-10
 Identities = 33/55 (60%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +3

Query: 3   CKLQQADGGK-NHTVSDSNSEALESVAKVEVIQQMFLNYLQDATSTDDAHLFVRW 164
           CK Q  D  K N   SD NSEA + + KVE++QQM LNYL DA S+DD HLFVRW
Sbjct: 674 CKSQCKDDEKRNRARSDKNSEASDPITKVEIVQQMLLNYLHDAGSSDDVHLFVRW 728



 Score = 23.1 bits (48), Expect(2) = 2e-10
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 241 FYLCLWY 261
           FYLCLWY
Sbjct: 729 FYLCLWY 735


>ref|XP_002324104.1| predicted protein [Populus trichocarpa] gi|222867106|gb|EEF04237.1|
           predicted protein [Populus trichocarpa]
          Length = 1815

 Score = 59.7 bits (143), Expect(2) = 3e-08
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = +3

Query: 30  KNHTVSDSNSEALESVAKVEVIQQMFLNYLQDATSTDDAHLFVRW 164
           K++  S +NS+A ++V K E++QQM LNYLQD  S DDA+LFVRW
Sbjct: 726 KDNIRSKNNSDASDTVTKAEIVQQMLLNYLQDVVSADDAYLFVRW 770



 Score = 23.1 bits (48), Expect(2) = 3e-08
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 241 FYLCLWY 261
           FYLCLWY
Sbjct: 771 FYLCLWY 777


>ref|XP_002526100.1| pearli, putative [Ricinus communis] gi|223534597|gb|EEF36294.1|
           pearli, putative [Ricinus communis]
          Length = 1758

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
 Frame = +3

Query: 3   CKLQQADGGK-NHTVSDSNSEALESVAKVEVIQQMFLNYLQDATSTDDAHLFVRWSIKVL 179
           C  Q  D GK N+   +   +A + + KVE++QQ+ LNYLQD+ S DD HLFVRW    L
Sbjct: 714 CNSQLKDEGKKNNNRLEKKYKACDPITKVEIVQQLLLNYLQDSVSADDVHLFVRWFYLCL 773

Query: 180 EHLFDKVLCPSLLMLLT 230
            +  D      L+  LT
Sbjct: 774 WYKDDPKSQQKLIYYLT 790


>ref|XP_004137294.1| PREDICTED: nipped-B-like protein-like [Cucumis sativus]
          Length = 1822

 Score = 56.2 bits (134), Expect(2) = 3e-07
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +3

Query: 3   CKLQ-QADGGKNHTVSDSNSEALESVAKVEVIQQMFLNYLQDATSTDDAHLFVRW 164
           CK Q + D  K    SD  S A   V+ +E++QQ+ LNYLQ+  STDD HLFVRW
Sbjct: 729 CKSQCKNDSEKRKDWSDKGSNASWLVSNIEIVQQLLLNYLQEVGSTDDLHLFVRW 783



 Score = 23.1 bits (48), Expect(2) = 3e-07
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 241 FYLCLWY 261
           FYLCLWY
Sbjct: 784 FYLCLWY 790


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