BLASTX nr result

ID: Coptis25_contig00033681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033681
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265858.1| PREDICTED: DUF246 domain-containing protein ...    80   2e-13
ref|XP_002522480.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
gb|AAF79406.1|AC068197_16 F16A14.24 [Arabidopsis thaliana]             65   6e-09
ref|NP_172855.2| O-fucosyltransferase family protein [Arabidopsi...    65   6e-09
gb|AAD39288.1|AC007576_11 Similar to auxin-independent growth pr...    65   6e-09

>ref|XP_002265858.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera] gi|296087792|emb|CBI35048.3| unnamed protein
           product [Vitis vinifera]
          Length = 504

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 33/48 (68%), Positives = 41/48 (85%)
 Frame = -3

Query: 212 QIWFIRICSSILIWTCLVQFVTVGELWNPKLLTGLSYQFTRITHFSLH 69
           Q+WFIR+CSSIL+WTCLVQ V VGELW+P+LLTG+S   +RIT + LH
Sbjct: 27  QVWFIRVCSSILLWTCLVQLVAVGELWHPRLLTGISSHLSRITPYPLH 74


>ref|XP_002522480.1| conserved hypothetical protein [Ricinus communis]
           gi|223538365|gb|EEF39972.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 520

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = -3

Query: 212 QIWFIRICSSILIWTCLVQFVTVGELWNPKLLTGLSYQFTRITHFSLH 69
           Q+WFIR+CSSIL+WT LVQ V VGELW P  ++  +++ ++IT F LH
Sbjct: 27  QVWFIRVCSSILLWTGLVQLVAVGELWRPNFISTFTHKISQITPFPLH 74


>gb|AAF79406.1|AC068197_16 F16A14.24 [Arabidopsis thaliana]
          Length = 507

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 24/43 (55%), Positives = 34/43 (79%)
 Frame = -3

Query: 212 QIWFIRICSSILIWTCLVQFVTVGELWNPKLLTGLSYQFTRIT 84
           Q+WF+R+CSSIL+WTCLVQ    GELW+ ++ TGL+ Q +R +
Sbjct: 29  QVWFVRVCSSILVWTCLVQLFAAGELWHSRIFTGLTNQISRFS 71


>ref|NP_172855.2| O-fucosyltransferase family protein [Arabidopsis thaliana]
           gi|37202038|gb|AAQ89634.1| At1g14020 [Arabidopsis
           thaliana] gi|110739513|dbj|BAF01665.1| growth regulator
           like protein [Arabidopsis thaliana]
           gi|110739824|dbj|BAF01818.1| growth regulator like
           protein [Arabidopsis thaliana]
           gi|332190978|gb|AEE29099.1| O-fucosyltransferase family
           protein [Arabidopsis thaliana]
          Length = 499

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 24/43 (55%), Positives = 34/43 (79%)
 Frame = -3

Query: 212 QIWFIRICSSILIWTCLVQFVTVGELWNPKLLTGLSYQFTRIT 84
           Q+WF+R+CSSIL+WTCLVQ    GELW+ ++ TGL+ Q +R +
Sbjct: 29  QVWFVRVCSSILVWTCLVQLFAAGELWHSRIFTGLTNQISRFS 71


>gb|AAD39288.1|AC007576_11 Similar to auxin-independent growth promoter protein [Arabidopsis
           thaliana]
          Length = 509

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 24/43 (55%), Positives = 34/43 (79%)
 Frame = -3

Query: 212 QIWFIRICSSILIWTCLVQFVTVGELWNPKLLTGLSYQFTRIT 84
           Q+WF+R+CSSIL+WTCLVQ    GELW+ ++ TGL+ Q +R +
Sbjct: 29  QVWFVRVCSSILVWTCLVQLFAAGELWHSRIFTGLTNQISRFS 71


Top