BLASTX nr result

ID: Coptis25_contig00033670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00033670
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249...   200   9e-51
emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]   199   2e-50
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]   197   7e-50
emb|CAN83738.1| hypothetical protein VITISV_014440 [Vitis vinifera]   197   7e-50
emb|CAN61586.1| hypothetical protein VITISV_042821 [Vitis vinifera]   195   9e-50

>ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249836 [Vitis vinifera]
          Length = 1552

 Score =  200 bits (509), Expect(2) = 9e-51
 Identities = 95/220 (43%), Positives = 148/220 (67%), Gaps = 3/220 (1%)
 Frame = +1

Query: 7   GSIRGFKAAANGPE---VSHQYIPDDTLFLLDASVPQLLTIKAVLLIFQAVSGLKTNMAK 177
           G I G +    G +   VSH    DDTL    A   QL  +  +L  F+A SGL+ N+AK
Sbjct: 207 GFISGCRMRGRGGDELTVSHLLFADDTLIFCKARREQLTNLSWILAWFEAASGLRINLAK 266

Query: 178 TSILTVGKVEHLAELSQAMGCAVEQLPCKYLGIPLGSTYRNKKVWEPVIDTVQRRLGGWR 357
           + ++ VG+V+ + EL+  +GC +  LP  YLG+PLG+ ++N   W+ V + ++RRL  W+
Sbjct: 267 SVLIPVGEVDGMEELAAELGCKLGTLPAVYLGLPLGANHKNASSWDGVEERMRRRLAQWK 326

Query: 358 CKLMSKEERLILASSVLSNLPIYVMSLLCIPKGVAEIIERLIRDFIWGSSNEQRKYHLVD 537
            + +SK  R+ L  S L+++PIY++SL+ IPK VA+ IE++ RDF+WG  + + K HL++
Sbjct: 327 RQYISKGGRMTLIKSTLASIPIYLLSLIRIPKVVAKRIEKIQRDFLWGGGSLEGKGHLIN 386

Query: 538 WEKVCSPKEDGGLGLRKLVVMNQALLGRWLWRYMVEEDSL 657
           W+ VCSPKE+GGLG+RK+ ++N+ LLG+W+WRY  E+D+L
Sbjct: 387 WQVVCSPKEEGGLGIRKIDLLNKTLLGKWVWRYAYEKDNL 426



 Score = 26.6 bits (57), Expect(2) = 9e-51
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 660 RAVICAKYSNDSQRWWPKETTQSHGCSLWRGILK 761
           +  I  KY  +   W  KE    +G  LW+ I+K
Sbjct: 428 KKAIGVKYGQEGCGWRTKEVCGPYGVGLWKEIMK 461


>emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]
          Length = 1653

 Score =  199 bits (506), Expect(2) = 2e-50
 Identities = 91/203 (44%), Positives = 142/203 (69%)
 Frame = +1

Query: 49   VSHQYIPDDTLFLLDASVPQLLTIKAVLLIFQAVSGLKTNMAKTSILTVGKVEHLAELSQ 228
            VSH    DDTL    A   QL  +  +L  F+A SGL+ N+AK+ ++ VG+V+ + EL+ 
Sbjct: 1266 VSHLLFADDTLIFCKARREQLTNLSWILAWFEAASGLRINLAKSVLIPVGEVDGMEELAA 1325

Query: 229  AMGCAVEQLPCKYLGIPLGSTYRNKKVWEPVIDTVQRRLGGWRCKLMSKEERLILASSVL 408
             +GC +  LP  YLG+PLG+ ++N   W+ V + ++RRL  W+ + +SK  R+ L  S L
Sbjct: 1326 ELGCKLGALPAVYLGLPLGANHKNASSWDGVEERMRRRLAQWKRQYISKGGRMTLIKSTL 1385

Query: 409  SNLPIYVMSLLCIPKGVAEIIERLIRDFIWGSSNEQRKYHLVDWEKVCSPKEDGGLGLRK 588
            +++PIY++SL+ IPK VA+ IE++ RDF+WG  + + K HL++W+ VCSPKE+GGLG+RK
Sbjct: 1386 ASIPIYLLSLIRIPKVVAKRIEKIQRDFLWGGGSLEGKGHLINWQVVCSPKEEGGLGIRK 1445

Query: 589  LVVMNQALLGRWLWRYMVEEDSL 657
            + ++N+ LLG+W+WRY  E+D+L
Sbjct: 1446 IDLLNKTLLGKWVWRYAYEKDNL 1468



 Score = 26.6 bits (57), Expect(2) = 2e-50
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 660  RAVICAKYSNDSQRWWPKETTQSHGCSLWRGILK 761
            +  I  KY  +   W  KE    +G  LW+ I+K
Sbjct: 1470 KKAIGVKYGQEGCGWRTKEVCGPYGXGLWKEIMK 1503


>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
          Length = 2416

 Score =  197 bits (500), Expect(2) = 7e-50
 Identities = 88/203 (43%), Positives = 141/203 (69%)
 Frame = +1

Query: 49   VSHQYIPDDTLFLLDASVPQLLTIKAVLLIFQAVSGLKTNMAKTSILTVGKVEHLAELSQ 228
            VSH    DDT+    A   Q+  +  +L  F+A SGL+ N+AK++++ VG+V+ L EL+ 
Sbjct: 1362 VSHLLFADDTIIFCKAEREQVTNLSWILAWFEAASGLRINLAKSALIPVGQVDELEELAA 1421

Query: 229  AMGCAVEQLPCKYLGIPLGSTYRNKKVWEPVIDTVQRRLGGWRCKLMSKEERLILASSVL 408
             +GC +  LP  YLG+PLG+ ++    W+ V + ++RRL  W+ + +SK  R+ L  S L
Sbjct: 1422 ELGCKLGALPTVYLGLPLGAHHKTSSSWDGVEERMRRRLAQWKKQYISKGGRITLIKSTL 1481

Query: 409  SNLPIYVMSLLCIPKGVAEIIERLIRDFIWGSSNEQRKYHLVDWEKVCSPKEDGGLGLRK 588
            +++PIY +SL+ IPK V + IE++ +DF+WG  + +RK HL+ W+ VCSPKE+GGLG+RK
Sbjct: 1482 ASIPIYFLSLIRIPKSVTKRIEKIQKDFLWGGGSLERKAHLIKWKVVCSPKEEGGLGIRK 1541

Query: 589  LVVMNQALLGRWLWRYMVEEDSL 657
            + ++N+ALLG+W+WRY  E+++L
Sbjct: 1542 IDLLNKALLGKWVWRYAYEKENL 1564



 Score = 26.9 bits (58), Expect(2) = 7e-50
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 660  RAVICAKYSNDSQRWWPKETTQSHGCSLWRGILK 761
            + VI  KY  +   W  K+    +G  LW+ I+K
Sbjct: 1566 KRVIGVKYGQEGCGWRTKDVCGPYGVGLWKEIMK 1599


>emb|CAN83738.1| hypothetical protein VITISV_014440 [Vitis vinifera]
          Length = 666

 Score =  197 bits (500), Expect(2) = 7e-50
 Identities = 90/203 (44%), Positives = 140/203 (68%)
 Frame = +1

Query: 49  VSHQYIPDDTLFLLDASVPQLLTIKAVLLIFQAVSGLKTNMAKTSILTVGKVEHLAELSQ 228
           VSH    DDT+    A   Q+  +  VL  F+A SGL  N+AK++++ VG+V+ L EL+ 
Sbjct: 317 VSHLLFADDTIIFCKAKREQVTNLSWVLAWFEAASGLXINLAKSALIPVGQVDELEELAA 376

Query: 229 AMGCAVEQLPCKYLGIPLGSTYRNKKVWEPVIDTVQRRLGGWRCKLMSKEERLILASSVL 408
            +GC +  LP  YLG+PLG+ ++    W+ V + ++RRL  W+ + +SK  R+ L  S L
Sbjct: 377 ELGCRLGVLPTVYLGLPLGAHHKTSSSWDGVEERMRRRLAQWKRQYISKGGRITLIKSTL 436

Query: 409 SNLPIYVMSLLCIPKGVAEIIERLIRDFIWGSSNEQRKYHLVDWEKVCSPKEDGGLGLRK 588
           +++PIY +SL+ IPK V + IE++ RDF+WG  + +RK HL+ W+ VCSPKE+GGLG+RK
Sbjct: 437 ASIPIYFLSLIRIPKSVTKRIEKIQRDFLWGGGSLERKAHLIKWKVVCSPKEEGGLGIRK 496

Query: 589 LVVMNQALLGRWLWRYMVEEDSL 657
           + ++N+ALLG+W+WRY  E+++L
Sbjct: 497 IDLLNKALLGKWVWRYAYEKENL 519



 Score = 26.9 bits (58), Expect(2) = 7e-50
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 660 RAVICAKYSNDSQRWWPKETTQSHGCSLWRGILK 761
           + VI  KY      W  KE    +G  LW+ I+K
Sbjct: 521 KMVIGVKYGQKECGWRTKEVCGPYGVGLWKEIMK 554


>emb|CAN61586.1| hypothetical protein VITISV_042821 [Vitis vinifera]
          Length = 1302

 Score =  195 bits (496), Expect(2) = 9e-50
 Identities = 87/203 (42%), Positives = 140/203 (68%)
 Frame = +1

Query: 49   VSHQYIPDDTLFLLDASVPQLLTIKAVLLIFQAVSGLKTNMAKTSILTVGKVEHLAELSQ 228
            VSH    DDT+    A   Q+  +  +L+  +A SGL+ N+AK++++ VG+V+ L EL+ 
Sbjct: 866  VSHLLFADDTIIFCKAKREQVTNLSWILVWLEAASGLRINLAKSALIPVGQVDELEELAA 925

Query: 229  AMGCAVEQLPCKYLGIPLGSTYRNKKVWEPVIDTVQRRLGGWRCKLMSKEERLILASSVL 408
             +GC +  LP  YLG+PLG+ ++    W+ V + ++RRL  W+ + +SK  R+ L  S L
Sbjct: 926  ELGCRLGVLPTVYLGLPLGAHHKTSSXWDGVEERMRRRLAQWKRQYISKGGRITLIKSTL 985

Query: 409  SNLPIYVMSLLCIPKGVAEIIERLIRDFIWGSSNEQRKYHLVDWEKVCSPKEDGGLGLRK 588
            +++PIY +SL+ IPK V + IE++ RDF+WG  + +RK HL+ W+ VCSPKE+GGLG+RK
Sbjct: 986  ASIPIYFLSLIXIPKSVTKRIEKIQRDFLWGGGSLERKAHLIKWKVVCSPKEEGGLGIRK 1045

Query: 589  LVVMNQALLGRWLWRYMVEEDSL 657
            + ++N+ LLG+W+WRY  E+++L
Sbjct: 1046 IDLLNKXLLGKWVWRYAYEKENL 1068



 Score = 28.1 bits (61), Expect(2) = 9e-50
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 660  RAVICAKYSNDSQRWWPKETTQSHGCSLWRGILK 761
            + VI  KY  +   W  KE    +G  LW+ I+K
Sbjct: 1070 KMVIGVKYGQEGCGWRTKEVCGPYGVGLWKEIMK 1103


Top